Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0308 ATGGGGGAGCAAGTAGCAGCGGTGCACACTGCTTCTAACGCTTTGCAAGCATTAGGGAGGGGTTTTGATGTGAACTTTGATACGAGGTTGCTTTATTGTAAAGGAGTTTCAGGGTCTAGGGTAGTTGAGATTGATGAAGAACACCGTAGGGAGCTGTGGTTGTACAAGGATGTGGCCGTTCCCGATGTTTCCAGGGACATTGGATGCTCCCCGGAGGCCATGGTGCGTCAGAGTTCTGGGGTCCGCAGTTTTCCAGAGATGGTGGAATACTTTAATGAAAGGGCAAATATATCAGGGAACTTCCCTATTGGGAGTTTTAATTCTGCATTTAGCTTCACTGGTTCAAAACATGTTGATGCTGCAGCTACGAAAACCTTGTCCTCAGATGGGTTTTACATTCCTCTTGCAAAGGTTCAGCTTCAAAAATCCCACCTAACGTTGCAAGGAAATGTCAAAAAGGCTGTCCCAGTCAATTGGGACCCACCGTCCTTGGCAAGTTTTATTGAAAATTTTGGGACTCATGTCATTACATCAATAACTATGGGTGGTAAAGATGTTATTTATGTTAAACAACATCATACTTCTCCTTTGTCAAAGTTGGAGATGAAAAACTATATTCAGGATATTGGAAATCAGAGGTTCTCTGACATCAATAGCCAAACAAGTTCAGGGCAAACAAAATCCAAGGATAAGGGTGTTGATGCATTTTCATTCAATAGTCAAGGGGTTTACCCCCAACCCACGACTGCAACATATCCTATTGGGAAAGAAGATGTCACAGTCATTTTTAGAAGAAGAGGAGGAGATGATTTGGAACAAAACCACAGTAAATGGATATCAACTATCCAGTCCTCCCCAGATATCATTGAGATGACTTTCTGTCCTATAACTGATCTCCTTGATGAAGTACCTGCCAAGGAGCATTTGACTCGTGCCATTAGTCTTTATCTTGAATATAAACCTCCAATAGAAGAACTTAGATATTTCCTAGAGTTTCAGATTCCTTGTGTATGGGCTCCTTTACAGGACAGGATTCCTGGTCAACAAAGGAAGGAACCTGTATGCCCATCTTTGCAATTCAGCATAATGGGCCAGAAACTTTACATTAGTCAAGAACAGATTACAGTCGGACGTAGGCCAGTAACTGGCTTATGTCTTTGTCTAGAAGGAAGCAAGCAGAATCGGCTGAGTGTTCACGTTCAACACTTAGTATCTCTTCCGAAAATCCTTCATCCATATTGGGACAGTCATGTCGCTATAGGCGCTCCCAAGTGGCAGGGCCCTGAGGAGCAAGACAGCCGGTGGTTTGAGCCTGTTAAGTGGAAGAACTTTTCTCACGTGAGCACAGCACCAATTGAGAACCCTGAAACCTTCATAGGAGACTTCTCTGGTGTCTACATAGTTACTGGAGCACAACTTGGAGTGTGGGATTTTGGTTCAAGGAATGTATTGTACATGAAGCTCTTGTATTCAAGGTTACCTGGCTGCACGATCCGAAGATCGCTGTGGGATCACGTCCCAAACAAGCCGCCAAAAACAGTGAATGCTGAAAACACCTCCAACCCGGATAACTCAACCCTTAGAGAAAATGCCACAGCCAACAAGTTGGTGAAGTATGTTGACTTGTCTAAGATGACCAAAGGACCCCAAGACCCTCCTGGCCATTGGTTAGTCACTGGTGGAAAGCTTGGTGTTGAAAAAGGGAAAGTTGTTTTGAGAGTGAAATATTCATTGCTTAATTACTGA 1746 0.4364 MGEQVAAVHTASNALQALGRGFDVNFDTRLLYCKGVSGSRVVEIDEEHRRELWLYKDVAVPDVSRDIGCSPEAMVRQSSGVRSFPEMVEYFNERANISGNFPIGSFNSAFSFTGSKHVDAAATKTLSSDGFYIPLAKVQLQKSHLTLQGNVKKAVPVNWDPPSLASFIENFGTHVITSITMGGKDVIYVKQHHTSPLSKLEMKNYIQDIGNQRFSDINSQTSSGQTKSKDKGVDAFSFNSQGVYPQPTTATYPIGKEDVTVIFRRRGGDDLEQNHSKWISTIQSSPDIIEMTFCPITDLLDEVPAKEHLTRAISLYLEYKPPIEELRYFLEFQIPCVWAPLQDRIPGQQRKEPVCPSLQFSIMGQKLYISQEQITVGRRPVTGLCLCLEGSKQNRLSVHVQHLVSLPKILHPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENPETFIGDFSGVYIVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDHVPNKPPKTVNAENTSNPDNSTLRENATANKLVKYVDLSKMTKGPQDPPGHWLVTGGKLGVEKGKVVLRVKYSLLNY* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0308 581 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1-LIKE 6 581 - -
Gso3g0308 581 MobiDBLite consensus disorder prediction 509 528 - -
Gso3g0308 581 MobiDBLite consensus disorder prediction 512 528 - -
Gso3g0308 581 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 581 IPR044663 GO:0006952|GO:0012501|GO:2000031
Gso3g0308 581 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 330 IPR020864 -
Gso3g0308 581 SMART MACPF_8 123 318 IPR020864 -
Gso3g0308 581 Pfam MAC/Perforin domain 104 316 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0308 Gso-Chr3 4587145 4594462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0308 - - gmx:100817248 1122.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1123 1 45602412 45609064 Gso3g0308 3 4587145 4594462 GST