Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1123 ATGGGGGAGCATGTAGCAGCGGTGCACACTGCTACTAACGCTTTGCAAGCATTAGGGAGGGGTTTTGATGTGAACTTTGATACGAGGTTGCTTTATTGTAAAGGAGTTTCAGGGTCTAGGGTAGTTGAGATTGATGAAGAACACCGTAGGGAGCTGTGGTTGTACGAGGATGTGGCTGTTCCCGATGTTTCCAGGGACATTGGATGCTACCAGGAGGCTATGGTGCGTCAGAGTTCTGGGGTCCGCAGTTTTAAAGAGATGGTGGAATACTTTAATGAAAGGGCAAATGTATCAGGGAAGTTTCCTATTGGGAGTTTTAATTCTGCATTTAGCTTCACTGGTTCAAAACATGTTGATGAAGCAGCTACAAAAACCTTGTCTTCAGATGGGTTTTACATTCCTCTTGCAAAGGTTCAGCTTCAAAAATCCCACTTAAGGTTGCAAGGAAATGTCAAAAAGGCTGTCCCAGTCAATTGGGACCCACTGTCCTTGGCAAGTTTTATTGAAAATTTTGGGACTCATGTCATTACATCAATAACTATGGGTGGTAAAGATGTTATTTATGTTAAACAACACCATACTTCTCCTTTGTCAAAGTTGGAGATGAAAAACTATATTCAGGATATTGGAAATCAGAGGTTCTCTGACATCAACAGCCAAACAAGTTCAGGGCAAACAAAATCTAAGGATAAGGGTGTTGATCCCTTTTCATTCAATAGTCAAGGGGTTTATCCCCAACCCACGACTGCAACATATCCTATTGGGAAAGAAGTATGTAATGATGTCACAGTCATTTTTAGAAGAAGAGGAGGAGATGATTTGGAACAAAACCACAGTAAATGGTTATCAACTATCAAGTCCTCCCCAGATATCATTGAGATGACTTTCTGTCCTATAACTGATCTCCTTGATGAGATACCTGCCAAGGAGCATTTGACTCGTGCCATTGGTCTTTATCTTGAATATAAACCTCCTATTGAAGAACTTAGATATTTCCTAGAGTTTCAGATTCCTTGTGTATGGGCTCCTTTACAGGACAAGATTCCTGGTCAACAAAGGAAGGAACCTGTATGCCCATCTTTGCAATTCAGCATAATGGGCCAGAAACTTTATGTCAGTCAAGAACAGATTACAGTCGGACGTAGGCCAGTAACTGGCTTACATCTTTGTCTAGAAGGAAGCAAGCAGAATCGGCTGAGTGTTCACGTTCAACACTTGGTATCCCTTCCGAAAATCCTTCACCCATATTGGGACAGCCATGTCGCTATAGGTGCTCCCAAGTGGCAGGGCCCTGAGGAGCAAGACAGCCGGTGGTTTGAGCCTGTTAAGTGGAAGAACTTTTCTCATGTGAGCACGGCACCAATTGAGAACCTTGAAACCTTCATAGGAGACTTCTCTGGTGTCTACATAGTTACTGGAGCACAACTTGGAGTGTGGGATTTCGGATCACGGAATGTATTGTACATGAAGCTCTTATATTCAAGGTTACCTGGATGCACGATCCGAAGATCGCTTTGGGATCACATCCCGAACAAGCCGCCAAAGACTGTGAATGCTGGAAACACCTCCAACCTTGATAACTCAACCCTTAAAGAAAATGCCACAGGCAACAAGTTGGTGAAGTATGTTGACTTGTCTGAGATGACCAAAGGACCCCAAGACCCTCCTGGCCATTGGTTAGTCACTGGTGGAAAGCTTGGTGTTGAAAAAGGGAAAATTGTTTTGAGAGTGAAATATTCATTGCTTAATTACTGA 1755 0.4302 MGEHVAAVHTATNALQALGRGFDVNFDTRLLYCKGVSGSRVVEIDEEHRRELWLYEDVAVPDVSRDIGCYQEAMVRQSSGVRSFKEMVEYFNERANVSGKFPIGSFNSAFSFTGSKHVDEAATKTLSSDGFYIPLAKVQLQKSHLRLQGNVKKAVPVNWDPLSLASFIENFGTHVITSITMGGKDVIYVKQHHTSPLSKLEMKNYIQDIGNQRFSDINSQTSSGQTKSKDKGVDPFSFNSQGVYPQPTTATYPIGKEVCNDVTVIFRRRGGDDLEQNHSKWLSTIKSSPDIIEMTFCPITDLLDEIPAKEHLTRAIGLYLEYKPPIEELRYFLEFQIPCVWAPLQDKIPGQQRKEPVCPSLQFSIMGQKLYVSQEQITVGRRPVTGLHLCLEGSKQNRLSVHVQHLVSLPKILHPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENLETFIGDFSGVYIVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDHIPNKPPKTVNAGNTSNLDNSTLKENATGNKLVKYVDLSEMTKGPQDPPGHWLVTGGKLGVEKGKIVLRVKYSLLNY* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1123 584 MobiDBLite consensus disorder prediction 216 240 - -
Gso1g1123 584 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1-LIKE 6 584 - -
Gso1g1123 584 SMART MACPF_8 123 321 IPR020864 -
Gso1g1123 584 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 584 IPR044663 GO:0006952|GO:0012501|GO:2000031
Gso1g1123 584 Pfam MAC/Perforin domain 104 319 IPR020864 -
Gso1g1123 584 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 333 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1123 Gso-Chr1 45602412 45609064 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1123 - - gmx:100817248 1199.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1123 1 45602412 45609064 Gso3g0308 3 4587145 4594462 GST