Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0271 ATGGATTATTCGGGCTACAACTACCAGCAGCAACCACAACAACATTCCTATGGCTACAACCCTTCTCAGATCCAAATCCATCCCTACGATCAATCATATGCCTACCAACAATACTACACTTACAATCCCCAATATGCATATTTTCCCAATGCATATCAAGCCCAATTTCAATTCCAACCTGAATCCACCCTGCTTCACCCTCTTGGCGTCTACCTCATTGCTCCCGAATCCACCCTGCTTCACCCTCCTGGTGTCTACCCCATTGCTCCTGAACCCACCCTGCTTCACCCTCCTGGCATCTACCCCGTCGCTCCTGAACCCACCCTGTTTCACCCTCCTGGCGTCTACCCCGTCGCTCCCGAACCCGCCTCGACTGGGCCATCTCAATACAGAGGTAGGGGTGGCAGGGGTGGTAGACCATTTAGAGGGGCTGGTCGTGGTCGAGGCCATGGTAGGGGACATGGAATGGGGGGTGGTAGACACATACCATCTCATTCTTCTGGACCTGCTTTTTCTAATGTGCCAGCTCGAGTGCAACCACCAGTACCACCACGTAAAGTGTGCTGTGAAATTTGTAAGGTTGAGTGCAATAGTCCAGAAATCTTGGAGCAACATAAGGTTGGGAGGAAACATCAGAAGAATATGAGGGTGCATGAAGAATCGCAAAGGCGCAATGCTATAAATGGACAACAAAGTGAGAAAATTCCTACCTCTCAATTGAACTTAACAGACCAACCTAAGGAAGTTCAGGAGTCCGAGAAAAATGAATGCCCCACAGAAAATATGGGCTCGGGGGTTATAATCAATAGTCACAAGGAGGAAATGCAGCTGCAGAATAATGTAGGAAACATTTCTGAGGTTCCAGCTGAAGTGCCCGAGGGAAAAACCGAGGATAACTCTGCTGCAAGAGGCCAAGGATTGAAGCGGAAGAAGAAAGGAGGAAAAGGAGGTAAATACATGAGAACTAATGATGGTTCTAAGCCAGTGGAACCTGCACAAACTATGTCTTTTAGATGTGAGCTGTGTGATGTTAAATGTGAGTCACAAGTTGTTTACCAGAGTCATGTGGCTGGGAAAAAACACCTATCAAAACTAAGGCGTGCTTCATCTGGAGTAGGCCAGCACCAGCAGCAAGCTCTGTCTGGGGCACTCTTAGGGCTTCAAGCAATTTACCCACCTGACATCAATGCTCTGTCTAATGCAATTAATGTTCAAGTCCAACAAGGTGATAATGATCCGCAGGTACTTTTGGCTCAGCTCCTAATGACCGTACTATCTCAAGCACAGGTTCCAGCAACGGCACCAGTGACAGGTGGCGTGGTCGCTCAGATACCAGTACCCACATCTATGGCTGGACCGAGTTATGAACCCCAGTTGTTGCAGACAAATCCTTCTGGGGAAACAAAAACTGAGCTGCCAGGTTCAAGTGTCGGCACCCAAATTGAAGGTGGAGGTTCTGAAACTAAACAACAGGTGTGA 1479 0.4821 MDYSGYNYQQQPQQHSYGYNPSQIQIHPYDQSYAYQQYYTYNPQYAYFPNAYQAQFQFQPESTLLHPLGVYLIAPESTLLHPPGVYPIAPEPTLLHPPGIYPVAPEPTLFHPPGVYPVAPEPASTGPSQYRGRGGRGGRPFRGAGRGRGHGRGHGMGGGRHIPSHSSGPAFSNVPARVQPPVPPRKVCCEICKVECNSPEILEQHKVGRKHQKNMRVHEESQRRNAINGQQSEKIPTSQLNLTDQPKEVQESEKNECPTENMGSGVIINSHKEEMQLQNNVGNISEVPAEVPEGKTEDNSAARGQGLKRKKKGGKGGKYMRTNDGSKPVEPAQTMSFRCELCDVKCESQVVYQSHVAGKKHLSKLRRASSGVGQHQQQALSGALLGLQAIYPPDINALSNAINVQVQQGDNDPQVLLAQLLMTVLSQAQVPATAPVTGGVVAQIPVPTSMAGPSYEPQLLQTNPSGETKTELPGSSVGTQIEGGGSETKQQV* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0271 492 MobiDBLite consensus disorder prediction 120 158 - -
Gso3g0271 492 Pfam Zinc-finger of C2H2 type 337 361 - -
Gso3g0271 492 Pfam Zinc-finger of C2H2 type 189 211 - -
Gso3g0271 492 MobiDBLite consensus disorder prediction 454 492 - -
Gso3g0271 492 Gene3D Classic Zinc Finger 173 220 - -
Gso3g0271 492 Gene3D Classic Zinc Finger 318 368 - -
Gso3g0271 492 MobiDBLite consensus disorder prediction 452 492 - -
Gso3g0271 492 MobiDBLite consensus disorder prediction 291 305 - -
Gso3g0271 492 MobiDBLite consensus disorder prediction 208 223 - -
Gso3g0271 492 MobiDBLite consensus disorder prediction 208 245 - -
Gso3g0271 492 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 1 459 - -
Gso3g0271 492 MobiDBLite consensus disorder prediction 291 329 - -
Gso3g0271 492 SMART c2h2final6 187 211 IPR013087 -
Gso3g0271 492 SMART c2h2final6 337 361 IPR013087 -
Gso3g0271 492 SUPERFAMILY beta-beta-alpha zinc fingers 328 368 IPR036236 -
Gso3g0271 492 SUPERFAMILY beta-beta-alpha zinc fingers 182 218 IPR036236 -
Gso3g0271 492 MobiDBLite consensus disorder prediction 224 245 - -
Gso3g0271 492 PANTHER OS06G0651300 PROTEIN-RELATED 1 459 - -
Gso3g0271 492 SMART ZnF_U1_5 184 218 IPR003604 GO:0003676|GO:0008270
Gso3g0271 492 SMART ZnF_U1_5 334 368 IPR003604 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0271 Gso-Chr3 3827401 3834570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0271 - - gmx:102668538 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1142 1 46087242 46095890 Gso3g0271 3 3827401 3834570 GST