Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0158 ATGACGCAGAGGAAGAACAGAGGCAAGGCTTCGTGTTTTCCTCTTCTCGGTTTCGTCCTCCTCTGCGTTCTCGCGCCGTTTTTTTTCTTCCTCTCCCGGAGGCTCTACGCCGCCCCGGATCAAGATTATATTTCAGCTGTTCCAAGTAAACAGGTTCGCAAATGGAGAGAATGGCAGGCTTTGCAGGACCTTAAATCACTTTTTTCAGAAGAGGTTCTTGATGTTATTGTATCCAGCACAAATGATTTGGGGCCTTTCAGTCTTGACAATTTCAGAAAAAATTTGTCTGCTTCATGGAGAGTTGGATTAGGAAATTCAAACGCTGAACATGAGCTAAACCAACAAACAACACATGTTAGACAAGAAAAGCCAGAGGTGAAGGAAGGTAGATCTTCAGATAATCCTTCTCAGTGGACTGATAGTTCCGCACAGCAAACCCGAAGGCATTTAATAGAGAAAAGGCGGGAAAAGCGTGCTGCTGAGTTGGTAAAAAAGGATAATGAAGTAGCTGTAAGAGTCGAAAATACAGCTATTGAACGCTCAAAATCTGTTGAGTCAGCCATTATAGGTAAATACAACATTTGGAGGAAAGAATTTGAGAATGAAAATGGCGATTCTACTGTTCGGTTGATGCGAGACCAGATCATTATGGCTAGGGTATATATAAGCATTGCAAAGTTGAAGAACAAGGTTGAACTGCATGAAGAACTAATTTCCCGGCTCAAAGAGAGTCAACGTGCTTTAGGTGATGCAGTTTCTGATGCGGATCTACATCACAGTACACATGGGAAAATAAAGGCTATGGGTCAAGTTCTATCAAAAGCAAGAGAGCAATTGTATGACTGCAAATTGGTCACTGGAAAACTAAGAGCAATGCTACAGACAGCTGATGATCAAGTTAGGAGTTTGAAGAAACAGAGCACATTCCTCAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATTCATTGTTTATCTATGCGCCTTACCATAGATTACTATCTCCTTCCTCCTGAAAAGAGAAAGTTCCCTGGGAGTGAGAATTTGGAGAATCCCAGTCTTTATCACTACGCACTGTTCTCAGATAATGTCTTGGCTGCATCTGTTGTTGTCAACTCAACTATTATGAATGCTAAGGATCCATCGAAGAATGTTTTTCACCTTGTTACTGATAAACTAAATTTTGGAGCCATGAGCATGTGGTTTCTTTTAAACCCTCCTGGAAAAGCTACAATCCATGTTGAAAACGTTGATGATTATAAGTGGTTGAACTCATCCTACTGCCCTGTCTTGCGGCAGCTTGAATCTGCTACATTGAAAGAGTTTTATTTCAAGGCAGGCCATCCAAACTCACTTTCTTCCGGGGCTTCCAATCTGAAGTATAGAAATCCGAAATATCTCTCAATGCTCAACCATCTGAGATTCTATCTTCCACAGGTTTATCCAAAATTGGATAAAATCTTATTTCTTGATGATGACATTGTTGTTCAGAAGGATTTGACTGGATTATGGGCTGTGGATCTTAATGGGAAAGTAAATGGTGCTGTTGAAACTTGTGGTCAAAGCTTTCACCGATTTGACAAGTACCTTAACTTTTCAAATCCTCACATCGCAAGAAATTTTGATCCAAATGCTTGTGGTTGGGCATACGGGATGAACATGTTTGATCTGAAGGTGTGGAAAAAGAAGGATATCACCGGCATATATCACAAGTGGCAGAATATGAATGAAGACAGGGTGCTGTGGAAGCTGGGGACGTTACCTCCGGGGCTAATAACGTTCTATGGGTTGACACATCCACTAGATAAATCATGGCATGTACTTGGTTTGGGTTATAATCCAAGTTTGGATCGATCAGAGATTGAGAATGCAGCAGTTGTACACTACAATGGTAATATGAAGCCATGGTTAGAAATTGCCATGACAAAGTATCGGTCTTACTGGACCAAGTATGTCAAGTACAATCATCCCTATCTTCAAAACTGTAAGCTAAATGAATAG 2001 0.4103 MTQRKNRGKASCFPLLGFVLLCVLAPFFFFLSRRLYAAPDQDYISAVPSKQVRKWREWQALQDLKSLFSEEVLDVIVSSTNDLGPFSLDNFRKNLSASWRVGLGNSNAEHELNQQTTHVRQEKPEVKEGRSSDNPSQWTDSSAQQTRRHLIEKRREKRAAELVKKDNEVAVRVENTAIERSKSVESAIIGKYNIWRKEFENENGDSTVRLMRDQIIMARVYISIAKLKNKVELHEELISRLKESQRALGDAVSDADLHHSTHGKIKAMGQVLSKAREQLYDCKLVTGKLRAMLQTADDQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKRKFPGSENLENPSLYHYALFSDNVLAASVVVNSTIMNAKDPSKNVFHLVTDKLNFGAMSMWFLLNPPGKATIHVENVDDYKWLNSSYCPVLRQLESATLKEFYFKAGHPNSLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVDLNGKVNGAVETCGQSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNMFDLKVWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLITFYGLTHPLDKSWHVLGLGYNPSLDRSEIENAAVVHYNGNMKPWLEIAMTKYRSYWTKYVKYNHPYLQNCKLNE* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0158 666 MobiDBLite consensus disorder prediction 131 145 - -
Gso3g0158 666 Pfam Glycosyl transferase family 8 324 640 IPR002495 GO:0016757
Gso3g0158 666 Coils Coil 224 244 - -
Gso3g0158 666 MobiDBLite consensus disorder prediction 106 148 - -
Gso3g0158 666 CDD GT8_like_1 355 653 - -
Gso3g0158 666 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 357 662 IPR029044 -
Gso3g0158 666 PANTHER HEXOSYLTRANSFERASE 8 666 - -
Gso3g0158 666 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 8 666 IPR029993 GO:0047262
Gso3g0158 666 SUPERFAMILY Nucleotide-diphospho-sugar transferases 355 664 IPR029044 -
Gso3g0158 666 MobiDBLite consensus disorder prediction 115 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0158 Gso-Chr3 1993809 2001366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0158 5 666 Glycosyltransferase AT3G61130 72.590 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0158 K13648 - gmx:102664546 1350.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0699 7 7592480 7600274 Gso3g0158 3 1993809 2001366 GST
Gso18g2042 18 53257995 53262882 Gso3g0158 3 1993809 2001366 PCT
Gso9g2196 9 46304117 46309104 Gso3g0158 3 1993809 2001366 PCT
Gso3g0158 3 1993809 2001366 Gso18g2042 18 53257995 53262882 PCT
Gso3g0158 3 1993809 2001366 Gso9g2196 9 46304117 46309104 PCT