Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2042 ATGGCACCCAACAACAACAGAACAAAGGGATCCCATTTTCCGCTTCTGGCCTTCCTCTTCCTCTGCCTCCTCGCGCCCCTCCTCTTCTTTTTCTTCGCATCGCCCCTTCACGATCAAGGTGATGACTCAGCTGTTTCGAGCGAAAAGGTTGCCAGATCGAAAGAATGGCAGGCATTGCAGGATCTTAAATTGCTTTTTTCAAAAGAGGTTCTTGATGTTATTGTGTCCAACACAAATGATGTGGGGCCTTTGAGCCTTGAGAATTTTAGAAAAAATAATCTGTCTGCTTCATGGAGAGTTGCTGGATTAAGGACTTCAAATGCTATGAATCAGCTCAACCAACCAGCAGACAATGTTAGAGAAGAGAAGCAAAATGGGAAGGAAGGAAGATTTTCAGTTGATCGTGCTCAGTGGACTGGCAGTCCTGCTCAGCTATCAAGAAGGCAATTAATAGAGAAAAGGAAGGAAAAACGTGCTGCTGAGTTGGTAAAACAGGATGATGAAGTAATTGTAAAACTTGAAGATTCAGCTATTGAACACTCAAAATCTGTTGATTCAGCAGTTCTAGGTAAATACAACATTTGGAGGAAAGAAAATGAGAATGAAAATGCTGATTCTACAGTACGGTTGATTCGAGACCAAATCATTATGGCTAAGGTTTACTTGAGTATTGCAAAGATGAAGAACAAGCTTCAACTGTACCAAGAACTGGAATTTCAGCTTAAAGAAAGTCAACGTGCTTTAGGTGAGGCAACTTCTGATGCTGACATGCATCACAGTGATCATGAAAAAATGAAAACTATGGGCCAAGTTCTTTCTAAGGCAAAAGAGCAACTGTATGACTGCGAGTTGGTTACTGGGAAATTGAGGGCAATGCTACAAACAGCTGATGAGCAGGTTAGAGGATTGAAGAAACAAAGCACATTCCTTAGTCAGTTGGCTGCCAAAACCATACCAGATGGAATTCACTGCCTATCTATGCGCCTTACCATAGATTACTACCTACTTCCCCTTGAAAAGAGAAAATTCCCTAGAAGTGAGAATTTGGAGAATCCTAGTCTCTATCATTATGCCCTGTTCTCGGACAATGTCTTGGCTGCATCTGTTGTTGTCAACTCAACCATTGTGAATGCAAAGGATCCTTCGAAGCATGTGTTTCACCTTGTTACTGATAAACTAAATTTTGGAGCCATGAACATGTGGTTTTTGTTGAATCCTCCTGGAAAAGCTACAATCAATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCATCCTACTGCCCAGTCTTGAGGCAGCTTGAATCTGCAACAATGAAAGAGTATTATTTCAAGGCAGGCCATCCAACTACTACTGGTGCTTCAAATCTCAAGTACAGAAATCCCAAATATCTGTCAATGCTCAACCACTTGAGATTCTATCTTCCACAAGTTTATCCAAAGTTGGATAAGATTCTTTTTCTGGATGATGACATTGTTGTCCAGAAGGATTTGACTGGATTATGGGCTGTGAATCTTAATGGAAAAGTAAATGGTGCTGTTTTAACATGCGGAGAGAGTTTTCACCGATTTGACAAGTACCTTAACTTTTCAAATCCGCATATTGCGAAAAATTTTGATCCAAATGCTTGTGGTTGGGCATACGGGATGAACATGTTTGATTTGAAGGTGTGGAAAAAGAAGGACATCACTGGCATATATCACAAGTGGCAGAATTTGAACGAAGACAGGGTGCTGTGGAAGCTGGGGACATTGCCTCCAGGGCTGATGACATTCTATGGATTAACACATCCGCTAAATAAATCATGGCACGTACTCGGTCTGGGCTACAATCCAAGTGTAGATCGTTCGGAGATCGATACTGCGGCAGTCATACACTACAATGGTAATATGAAGCCGTGGTTAGAGATAGCCATGACAAAGTATCGGTCTTACTGGACCAAATATGTCAAATTTAATCATCCCTATCTTCAGAATTGTAAGCTACGTGAATGA 1995 0.4105 MAPNNNRTKGSHFPLLAFLFLCLLAPLLFFFFASPLHDQGDDSAVSSEKVARSKEWQALQDLKLLFSKEVLDVIVSNTNDVGPLSLENFRKNNLSASWRVAGLRTSNAMNQLNQPADNVREEKQNGKEGRFSVDRAQWTGSPAQLSRRQLIEKRKEKRAAELVKQDDEVIVKLEDSAIEHSKSVDSAVLGKYNIWRKENENENADSTVRLIRDQIIMAKVYLSIAKMKNKLQLYQELEFQLKESQRALGEATSDADMHHSDHEKMKTMGQVLSKAKEQLYDCELVTGKLRAMLQTADEQVRGLKKQSTFLSQLAAKTIPDGIHCLSMRLTIDYYLLPLEKRKFPRSENLENPSLYHYALFSDNVLAASVVVNSTIVNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATINVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPTTTGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVNLNGKVNGAVLTCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNMFDLKVWKKKDITGIYHKWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYNPSVDRSEIDTAAVIHYNGNMKPWLEIAMTKYRSYWTKYVKFNHPYLQNCKLRE* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2042 664 SUPERFAMILY Nucleotide-diphospho-sugar transferases 355 661 IPR029044 -
Gso18g2042 664 Pfam Glycosyl transferase family 8 324 638 IPR002495 GO:0016757
Gso18g2042 664 Coils Coil 227 254 - -
Gso18g2042 664 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 7 664 IPR029993 GO:0047262
Gso18g2042 664 PANTHER HEXOSYLTRANSFERASE 7 664 - -
Gso18g2042 664 CDD GT8_like_1 355 651 - -
Gso18g2042 664 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 357 659 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2042 Gso-Chr18 53257995 53262882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2042 10 664 Glycosyltransferase AT3G61130 73.141 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2042 K13648 - gmx:100813219 1306.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2042 18 53257995 53262882 Gso9g2196 9 46304117 46309104 GST
Gso18g2042 18 53257995 53262882 Gso7g0699 7 7592480 7600274 PCT
Gso18g2042 18 53257995 53262882 Gso3g0158 3 1993809 2001366 PCT
Gso7g0699 7 7592480 7600274 Gso18g2042 18 53257995 53262882 PCT
Gso3g0158 3 1993809 2001366 Gso18g2042 18 53257995 53262882 PCT