Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0111 ATGGCAGAGCTCCAAACCAAGGTTGAACCTGTTCCAGTCCCGGCTCTGGCTCCGGTGGAGCCCGAGCCACCGCTGGCTGAGGCGCCGCCGCTCGAGCAGAAAGCGGTGGTGGTGCCTCCACCTGTTCCGGCAGCAGCAGAGGAAACCAAAGCTCTTGTTGTTGTGGAGAAGGAGAAGGAGAATGAGAAGATACCAGAACCTGTAAAAAAGAATGCCACAGGTGGATCCCTTGATAGAGACATTGCTCTTGCAGAAATAGAGAAAGAGAAAAGGTTGTCTAATGTGAAGGCATGGGAAGAAAGTGAAAAATCCAAAGCAGAGAATAAAGCCGAAAAACATCTCTCTGCTGTTGCTGCTTGGGAAAACAGCAAGATAGCAGCTCTTGAAGCTCAGCTGAGAAAAATTGAGGAACAAATGGAGAAAAAGAAAGCCGAATATGGTGAAAAGATGAAAAACAAAATAGTCTTAGTTCACAAGCAAGCAGAGGAGAAGAGAGCAATGGTTGAAGCCAAGCGTGGTGAAGAAATTCTCAAGGCAGAGGAAATAGCTGCAAAACACCGTGCAACTGGAACCACTCCAAAGAAGGCCTTTGGATGCTTTTAA 603 0.4743 MAELQTKVEPVPVPALAPVEPEPPLAEAPPLEQKAVVVPPPVPAAAEETKALVVVEKEKENEKIPEPVKKNATGGSLDRDIALAEIEKEKRLSNVKAWEESEKSKAENKAEKHLSAVAAWENSKIAALEAQLRKIEEQMEKKKAEYGEKMKNKIVLVHKQAEEKRAMVEAKRGEEILKAEEIAAKHRATGTTPKKAFGCF* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0111 200 Coils Coil 118 152 - -
Gso3g0111 200 Pfam Remorin, N-terminal region 32 86 IPR005518 -
Gso3g0111 200 PANTHER CARBOXY-TERMINAL REGION REMORIN 18 200 - -
Gso3g0111 200 Pfam Remorin, C-terminal region 90 195 IPR005516 -
Gso3g0111 200 MobiDBLite consensus disorder prediction 1 32 - -
Gso3g0111 200 PANTHER OS02G0117200 PROTEIN 18 200 - -
Gso3g0111 200 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0111 Gso-Chr3 1337550 1342043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0111 - - gmx:100782224 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0638 7 6799651 6803992 Gso3g0111 3 1337550 1342043 GST
Gso18g1985 18 52451937 52456766 Gso3g0111 3 1337550 1342043 PCT
Gso9g2155 9 45840237 45844914 Gso3g0111 3 1337550 1342043 PCT
Gso3g0111 3 1337550 1342043 Gso18g1985 18 52451937 52456766 PCT
Gso3g0111 3 1337550 1342043 Gso9g2155 9 45840237 45844914 PCT