Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1985 ATGGCAGAGCTGCAATCGAAGTCTGAAACTGCCCCTGCTCCGGCTCCGGTTGTGGCTGAGGTGCCATCGAACGACGCCGTTGCAAAGAAAGCTTCTGAAACAGGGGAATCCAAAGCTATTGTTTCTGTATCCGAGAAGACACCAGTTCCTGCAAACAAGCAAAGCTCAAGAGGATCCATTGATAGAGATATCGCTCTGGCTGAAGTAGAGAAAGAGAAAAAGTTGTCCTATGTGAAGGCATGGGAAGAAAGTGAGAAGGCCAAAGCAGAGAACAGAGCTCAAAAACATCTCTCAGCTATCGCTGCTTGGGAAAACAGCAAAAAGGCAGCTCTTGAAGCTGAGCTTAAAAAATTGGAGGAACAACTGGAGAAAAAGAAAGCAGAATATGGTGAAAAAATGAAGAACAAGGTGGCCTTAGTTCACAAGGAAGCAGAGGAGAAGAGGGCAATGATTGAAGCCAAGCGTGGTGAAGAGATTCTGCAGACAGAGGAAATGGCTGCAAAATACCGAGCAACAGGAACCACTCCAAAGAAGACTATAGGATGCTTTTGA 552 0.4601 MAELQSKSETAPAPAPVVAEVPSNDAVAKKASETGESKAIVSVSEKTPVPANKQSSRGSIDRDIALAEVEKEKKLSYVKAWEESEKAKAENRAQKHLSAIAAWENSKKAALEAELKKLEEQLEKKKAEYGEKMKNKVALVHKEAEEKRAMIEAKRGEEILQTEEMAAKYRATGTTPKKTIGCF* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1985 183 Coils Coil 86 135 - -
Gso18g1985 183 MobiDBLite consensus disorder prediction 1 58 - -
Gso18g1985 183 Pfam Remorin, N-terminal region 16 69 IPR005518 -
Gso18g1985 183 MobiDBLite consensus disorder prediction 37 58 - -
Gso18g1985 183 Pfam Remorin, C-terminal region 73 178 IPR005516 -
Gso18g1985 183 PANTHER CARBOXY-TERMINAL REGION REMORIN 1 183 - -
Gso18g1985 183 PANTHER OS02G0117200 PROTEIN 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1985 Gso-Chr18 52451937 52456766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1985 - - gmx:100305679 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1985 18 52451937 52456766 Gso9g2155 9 45840237 45844914 GST
Gso18g1985 18 52451937 52456766 Gso7g0638 7 6799651 6803992 PCT
Gso18g1985 18 52451937 52456766 Gso3g0111 3 1337550 1342043 PCT
Gso7g0638 7 6799651 6803992 Gso18g1985 18 52451937 52456766 PCT
Gso3g0111 3 1337550 1342043 Gso18g1985 18 52451937 52456766 PCT