Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0029 ATGACTATGAGGACAAAGCAAAGTTGTTTTTGGTGTTTGTGGATTTTGCTTTGTGGGTCTTGTGTGGGGAGGTTTGTGGTGGAGAAGAACAATTTGAAAATCACTTCTCCAAAATCATTGAGAGGTATATATGAATGTGCCATTGGAAATTTTGGGGTCCCCAAGTATGGTGGAACCATGATTGGCTCTGTGGTGTACCCCAAGTCCAATCAGAATGGATGTAGAAACTTTGATGCCTCGTTGAGTTCCAAGCCTGGAACCTTCCCCACCTTTGTTCTTGTTGATCGGGGAGATTGCTACTTCACTCTAAAGGCGTGGAATGCACAGAAAGGTGGAGCAGCAGCTATTCTTGTTGCAGATAACAGGATAGAACCATTGATCACAATGGACACTCCTGAAGAAGGGAATGGTGCCAAAGATGATGATTATATTGAGAAGATCAACATTCCTTCTGCTCTTATCAGCAAATCACTGGGGGATAACATCAAGCAGGCTCTCTCTAGTGGGGCTATGGTTAATGTAAATCTTGATTGGAGAGAGGCTCTTCCACACCCAGATGAGAGAGTTGAGTATGAGTTTTGGACAAGCAGCAATGATGAGTGTGGACCAAAGTGTGAAAGTGAAATTAACTTTGTCAAGAGTTTTAAAGGTGCAGCTCAATTACTTGAGCAGAAAGGGTTTGCAAAGTTCACCCCTCACTATATAACTTGGTATTGCCCAGAAGCATTCTTATTAAGCCAACAGTGCAAATCCCAGTGCATAAATAATGGGAGGTACTGTGCACCAGATCCCGAGCTAGATTTCAAAAGAGGGTACAATGGTAGAGATGTTGTTATCCAAAACTTACGTCAAGCATGCTTCTTTAAAGTGGCAAATGAAAGTAGAAAGCCTTGGCAATGGTGGGACTACGTGACCGACTTTTCCATCCGCTGCCCAATGAGAGAGAATAAGTACACTGAAGAATGCTCAGATCAAGTTATTAAATCTCTTGGTGTTGATTTGAAGAAAGTTAAAGACTGTGTTGGAGATCCTAGTGCAAATGCCGGAAACGCTGTTCTTAATGCTGAACAGGATGCACAGATTGGCAACGACGATCGTGGGGATGTTACTATACTACCTACTCTTATTATAAACAACAGACAATATAGAGGTAAGCTGTCAAGAGCAGCAGTACTCAAGGCAATCTGTTCAGGTTTCCAAGAGACCACTGAGCCATCAATTTGTTTAACTCCAGACATGGAAACAAATGAGTGTTTGCAAAACAATGGTGGTTGTTGGCAGGACAAAGCTTCTAACATTACTGCATGCAGGGACACTTTCAGAGGAAGAGTATGTGAATGCCCTATTATACAAAATGTGCAGTTTGTTGGTGATGGATACACCCACTGTGAAGCTACGGGCACTTTGAGGTGTGCAATCAACAATGGAGGTTGTTGGAAGGAAACTCGAGGTAGCAGGTCCTACTCTGCTTGTATTGATGGCCACACGAAAGGTTGCAAGTGTCCACCTGGATTTAGGGGTGATGGTGCCAACTCCTGTGAAGACGTGGATGAGTGCAAAGAGAAATTGGCGTGCCAGTGCCCAGAGTGCCAATGCAAAAATACCTGGGGAAGTTATGAATGCTCATGTAGTGATGGTTTGTTCTACGCACGAGAAAATGACATGTGTATTGGTAAATATGCTGCTTCGATGGCTGGTGGGGGCATTGTTTGGCTGGTTATTCTGGTTTTGGGTATTGCTGGTACCGGGGTATATGCATTTTACAAGTACAGAATCCAGAGATATATGGACTCTGAGATAAGGGCAATTATGGCCCAATACATGCCATTGGATAATCAACCAGAGATTTCTAGTCAAGCTCATGAAGGTGTCTAG 1875 0.4331 MTMRTKQSCFWCLWILLCGSCVGRFVVEKNNLKITSPKSLRGIYECAIGNFGVPKYGGTMIGSVVYPKSNQNGCRNFDASLSSKPGTFPTFVLVDRGDCYFTLKAWNAQKGGAAAILVADNRIEPLITMDTPEEGNGAKDDDYIEKINIPSALISKSLGDNIKQALSSGAMVNVNLDWREALPHPDERVEYEFWTSSNDECGPKCESEINFVKSFKGAAQLLEQKGFAKFTPHYITWYCPEAFLLSQQCKSQCINNGRYCAPDPELDFKRGYNGRDVVIQNLRQACFFKVANESRKPWQWWDYVTDFSIRCPMRENKYTEECSDQVIKSLGVDLKKVKDCVGDPSANAGNAVLNAEQDAQIGNDDRGDVTILPTLIINNRQYRGKLSRAAVLKAICSGFQETTEPSICLTPDMETNECLQNNGGCWQDKASNITACRDTFRGRVCECPIIQNVQFVGDGYTHCEATGTLRCAINNGGCWKETRGSRSYSACIDGHTKGCKCPPGFRGDGANSCEDVDECKEKLACQCPECQCKNTWGSYECSCSDGLFYARENDMCIGKYAASMAGGGIVWLVILVLGIAGTGVYAFYKYRIQRYMDSEIRAIMAQYMPLDNQPEISSQAHEGV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0029 624 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 11 604 - -
Gso3g0029 624 Gene3D Laminin 409 456 - -
Gso3g0029 624 PANTHER VACUOLAR-SORTING RECEPTOR 1 11 604 - -
Gso3g0029 624 SMART egfca_6 515 557 IPR001881 GO:0005509
Gso3g0029 624 Gene3D - 22 185 - -
Gso3g0029 624 Gene3D Laminin 469 553 - -
Gso3g0029 624 SUPERFAMILY PA domain 91 171 IPR046450 -
Gso3g0029 624 Gene3D Glutaredoxin 275 402 - -
Gso3g0029 624 CDD EGF_CA 515 546 - -
Gso3g0029 624 Pfam PA domain 62 162 IPR003137 -
Gso3g0029 624 ProSitePatterns Calcium-binding EGF-like domain signature. 515 541 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0029 Gso-Chr3 265389 271555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0029 13 619 Miscellaneous Gene Families AT2G30290 68.842 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0029 - - gmx:100807869 1325.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0029 3 265389 271555 Gso3g0029 3 265389 271555 ECH
Gso1g1097 1 44790909 44793081 Gso3g0029 3 265389 271555 GST
Gso9g2265 9 46906498 46912561 Gso3g0029 3 265389 271555 PCT
Gso3g0029 3 265389 271555 Gso9g2265 9 46906498 46912561 PCT