Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0021 ATGCTCGAGATAGGAAATGAAAGGATGAACAAAAATGAATATATTGTTCACTTCAGTTTATGGGCCACTTCCAAGGCCCCTCTTATTATCGGGTGTGATGTTAGAAATATGACTGAAGACACTAAAGAGATACTATCAAATACGGAGGTTATTGCAGTTAACCAAGATCCACTTGGTAAACAAGGTAAAAAGGTTAGGATGGAAAGCACTCTCGAGGTTTGGGCAGGTCCTCTTTCAGAATATAGGGTGGATGTTGTTTTACTCAATAAATACTCTGATCTTCGTGCGTCCATTACTGCTCTATGGGAAGATATTGGCCTTCATCCTTCAACTGTTGTTGAATCAAGAGATCTTTGGGAGCATAACACATTGGAAAGACAATTCAGTGGTAAATTGACTGACACTGTTGAACCACATTCTTGCAAAATGTATGTGTTGAAGCCAATAGCTTGA 453 0.3907 MLEIGNERMNKNEYIVHFSLWATSKAPLIIGCDVRNMTEDTKEILSNTEVIAVNQDPLGKQGKKVRMESTLEVWAGPLSEYRVDVVLLNKYSDLRASITALWEDIGLHPSTVVESRDLWEHNTLERQFSGKLTDTVEPHSCKMYVLKPIA* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0021 150 Pfam Alpha galactosidase C-terminal beta sandwich domain 69 146 IPR041233 -
Gso3g0021 150 SUPERFAMILY (Trans)glycosidases 1 57 IPR017853 -
Gso3g0021 150 PANTHER ALPHA-GALACTOSIDASE 1 1 148 - -
Gso3g0021 150 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 1 148 IPR002241 GO:0004553|GO:0005975
Gso3g0021 150 SUPERFAMILY Glycosyl hydrolase domain 58 149 - -
Gso3g0021 150 Gene3D Aldolase class I 1 58 IPR013785 -
Gso3g0021 150 Pfam Alpha galactosidase A 1 56 IPR002241 GO:0004553|GO:0005975
Gso3g0021 150 Gene3D - 59 149 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0021 Gso-Chr3 209303 212164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0021 1 146 Glycoside Hydrolase AT5G08370 59.589 3.24e-54 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0021 K07407 - gsj:114405351 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1750 18 49884923 49888593 Gso3g0021 3 209303 212164 PCT
Gso9g2257 9 46841074 46845288 Gso3g0021 3 209303 212164 PCT