Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0009 ATGAAGGTAGGATCTGGTAAAGGGAGAAAAGTGTGCCTGACGGTGACAGGTGTTGTGATTGCAATTGTATTGCTAATTGTGATACTAGCGTTGACAGTGTTCAAAGCCAAGCATCCTGTTACCACAGTGGACTCAACGAAGCTAGAGGACTTTCACGTGAGCTTGGATCCAGTAAAACTAAGGGTAGATTTGAATGTGACCCTGGGAGTGGATGTCTCAGTGAAGAACCCGAACAAGGTGGGATTCCAGTATTCAGACAGCACTGCCCACCTCAATTACAGAGGGCAGCTGATAGGTGAAGTCCCGATCTCTGCCGGAGAGATTTCATCCGGTGAGACCAAAGGATTCAATCTCACCCTCACCATTATGGCCGACCGTTTGCTCTCCAATTCTCAGCTTTTATCTGATGTCACATCTGGTACATTGCCCCTAAACACTTTCGTGAGGATGTCTGGGAAAGTCAGCATCTTAGGCTTTATCAAAGTCCATGTGGTTTCCTCCACTTCTTGTGATGTTGCAATTAATCTTTCTAATGGAACTGTTGGGAACCAAGAGTGCCAGTACAAGACAAAACTTTGA 579 0.4577 MKVGSGKGRKVCLTVTGVVIAIVLLIVILALTVFKAKHPVTTVDSTKLEDFHVSLDPVKLRVDLNVTLGVDVSVKNPNKVGFQYSDSTAHLNYRGQLIGEVPISAGEISSGETKGFNLTLTIMADRLLSNSQLLSDVTSGTLPLNTFVRMSGKVSILGFIKVHVVSSTSCDVAINLSNGTVGNQECQYKTKL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0009 192 Gene3D - 27 174 - -
Gso3g0009 192 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 191 - -
Gso3g0009 192 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 191 - -
Gso3g0009 192 Pfam Late embryogenesis abundant protein 72 169 IPR004864 -
Gso3g0009 192 SUPERFAMILY LEA14-like 36 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0009 Gso-Chr3 116723 118356 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0009 - - gmx:100811806 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0009 3 116723 118356 Gso3g0009 3 116723 118356 ECH
Gso18g1776 18 50165964 50168835 Gso3g0009 3 116723 118356 PCT
Gso9g2234 9 46647345 46648029 Gso3g0009 3 116723 118356 PCT
Gso3g0009 3 116723 118356 Gso18g1776 18 50165964 50168835 PCT
Gso3g0009 3 116723 118356 Gso9g2234 9 46647345 46648029 PCT