Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1776 ATGAAGAAGGGATCTGGCTGCAAAGGAAGCATTGTGTGCCTGATGGTAACATTATGTGTAGTGATTGCACTTGTATTGCTAGGAGTGATCTTAGCAATGACAGTGTTCAAACCTAGGCACCCTATTACCAATGTGGATTCCGTAAGGCTTCAAAACATGAGCTTGGACATGGACATATTTAGCATGAGTGTAAATGTGAACTTGACATTGGAAGTGGATGTTTCTGTTAACAACCCTAATAAGCTTGGATTCAATTACTACAATAGCTATGCTCAACTCAATTATAGAGGACAGTTGATTGGGGAAGCCCCTATACCCAATGGACACATATTAGCTGAGGAGATTAAGGGACTCAACTCGACACTAACTGTTATGGCTGACCGTTTGGTCTCAAATTCTGAGGTCACCAAGGATGTTGCATTGGGTTTATTGCCCCTCAACAGCTTGGTGAGAATTTTTGGCCAAGTCAACGTTTTAGGGTTTATCAAATTCTATGTGGCTTCCACCTCATCTTGTGATTTCACCCTCAATCTTTCCAATAGAACAATAGTGGACAATAAGTGCCAAGAGAAGACAAAGATTTCGGGTTGA 591 0.4129 MKKGSGCKGSIVCLMVTLCVVIALVLLGVILAMTVFKPRHPITNVDSVRLQNMSLDMDIFSMSVNVNLTLEVDVSVNNPNKLGFNYYNSYAQLNYRGQLIGEAPIPNGHILAEEIKGLNSTLTVMADRLVSNSEVTKDVALGLLPLNSLVRIFGQVNVLGFIKFYVASTSSCDFTLNLSNRTIVDNKCQEKTKISG* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1776 196 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 8 193 - -
Gso18g1776 196 Gene3D - 30 174 - -
Gso18g1776 196 SUPERFAMILY LEA14-like 30 131 - -
Gso18g1776 196 Pfam Late embryogenesis abundant protein 74 166 IPR004864 -
Gso18g1776 196 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 8 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1776 Gso-Chr18 50165964 50168835 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1776 - - gmx:100802530 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1776 18 50165964 50168835 Gso9g2234 9 46647345 46648029 GST
Gso18g1776 18 50165964 50168835 Gso3g0009 3 116723 118356 PCT
Gso3g0009 3 116723 118356 Gso18g1776 18 50165964 50168835 PCT