Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2580 ATGAATGAGGCACATAGCATCGGATCTGATATTGGTCTGAAGATGGGTGTGGCTGCTGAGTCTGAGTCAAATGACAACATCCCGCTGTTACTCACCCAATCTGCTTACCCTCTCAAAAGGACAGGGACGGTGTGGACAGCAGTGGCACACATAGTGACAGGGGTGATAGGATCCGGAGTGCTGTCTCTGCCATGGAGCACTGCACAGCTTGGGTGGCTTGCAGGCCCCTTCTCCATCCTTCTCATTGCTTCCACCACTCTCTTCTCTTCTTTTCTTCTATGCAACACTTATCGCCATCCCCATCCCGAATACGGTCCCAACAGAAGTGCCTCCTACCTTGATGTTGTTCATTTGCATTTAGGAATAAGTAATGGACGGCTCAGTGGCCTTCTTGTCAGTATTAGTTTGTATGGTTTTGCAATTGCCTTCGTCATTACAACAGCTATCAGCTTAAGAACAATCCAAAATTCATTTTGTTACCACAACAAAGGGCCTGAAGCAGTATGTGAGTCTGTAGATGCATATTATATGCTACTTTTTGGGGCTATCCAAATTGTTCTCTCACAGATACCCAACTTCCATAACATCAAATGGCTGTCGGTTGTTGCTGCAATTATGTCCTTTACTTATTCTTTCATAGGAATGGGGCTTTCCATTGCTCAAATCATAGAAAAAGGACATGCTGAGGGTAGCATTGGAGGAATCAGTACCTCTAATGGAGCTGAAAAGTTATGGCTGGTTTCTCAAGCACTTGGTGACATATCATTCTCATATCCATTCTCGACAATTCTTATGGAAATACAGGATACTTTGAAATCGCCTCCACCAGAAAACCAAACCATGAAGAAGGCCTCAGTAATAGCGGTCAGTGTCACAACATTCTTGTACCTCAGTTGTGGAGGTGCTGGATATGCTGCCTTTGGTGATAATACACCAGGAAACCTTTTAACAGGTTTCGTATCCTCCAAGTCTTATTGGCTAGTGAACTTTGCTAACGCTTGTATAGTGGTTCACCTAGTTGGTTCATATCAGGTGTATAGCCAGCCATTTTTTGGCACTGTGGAGAATTGGTTCCGTTTTAGATTCCCAGATAGTGAATTTGTGAATCACACATATATCTTGAAACTCCCGTTGCTTCCTGCCTTTGAACTTAATTTTCTCAGCCTGTCTTTCCGAACTGCTTATGTTGCATCCACAACTGTGATCGCAATGATATTTCCCTACTTCAATCAGATTTTGGGGGTTCTGGGTAGCATCATTTTTTGGCCGTTGACCATATATTTTCCAGTGGAAATATACTTGAGTCAGTCCAGTACTGTATCATGGACGACTAAGTGGGTACTGCTTCGGACTTTCAGCTTTTTTGGCTTTTTGTTTGGATTGTTCACTCTCATTGGATGTATTAAAGGAATAGTAACTGAAAAAATAAGCTGA 1434 0.4289 MNEAHSIGSDIGLKMGVAAESESNDNIPLLLTQSAYPLKRTGTVWTAVAHIVTGVIGSGVLSLPWSTAQLGWLAGPFSILLIASTTLFSSFLLCNTYRHPHPEYGPNRSASYLDVVHLHLGISNGRLSGLLVSISLYGFAIAFVITTAISLRTIQNSFCYHNKGPEAVCESVDAYYMLLFGAIQIVLSQIPNFHNIKWLSVVAAIMSFTYSFIGMGLSIAQIIEKGHAEGSIGGISTSNGAEKLWLVSQALGDISFSYPFSTILMEIQDTLKSPPPENQTMKKASVIAVSVTTFLYLSCGGAGYAAFGDNTPGNLLTGFVSSKSYWLVNFANACIVVHLVGSYQVYSQPFFGTVENWFRFRFPDSEFVNHTYILKLPLLPAFELNFLSLSFRTAYVASTTVIAMIFPYFNQILGVLGSIIFWPLTIYFPVEIYLSQSSTVSWTTKWVLLRTFSFFGFLFGLFTLIGCIKGIVTEKIS* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2580 477 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 17 476 - -
Gso2g2580 477 PANTHER OS05G0424000 PROTEIN-RELATED 17 476 - -
Gso2g2580 477 Pfam Transmembrane amino acid transporter protein 40 469 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2580 Gso-Chr2 50043733 50046949 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2580 39 454 Organic Solute Cotransporters AT1G77380 50.478 1.43e-148 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2580 K24917 - gmx:100788056 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0090 14 812582 815648 Gso2g2580 2 50043733 50046949 GST
Gso18g0612 18 6660404 6664394 Gso2g2580 2 50043733 50046949 PCT
Gso8g2783 8 45574061 45581399 Gso2g2580 2 50043733 50046949 PCT
Gso2g2580 2 50043733 50046949 Gso18g0612 18 6660404 6664394 PCT
Gso2g2580 2 50043733 50046949 Gso8g2783 8 45574061 45581399 PCT