Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0612 ATGAGAGAAGAAGGTTCAGGATATGACAGCACCCCTTTTTTGGATACCCAATATGCAGAATGTCACGTCGAAAGAACTGGTACAGTGTGGACTGCAGTGGCACACATAGTGACAGGAGTGATAGGGTCAGGAGTGTTGTCTTTGGCATGGAGCATTGCACAGCTTGGATGGATTGGAGGGCCACTCACTATTGTTTTCTTTGCTGCCATCACTCTCCTCTCTTCTTTCCTTCTTAGCAACACATATCGTTCTCCAGACCCTGAACTTGGCCCTCATAGGAGCTCCTCATACCTTGATGCTGTTAATTTGCATAAGGGGGAAGGGAATAGTCGCTTCTGTGCTGTTTTTGTGAACGTAAGCTTATATGGTTTTGGAATTGCTTATGTCATTACTGCTGCTATCAGCATGAGAGCAATCCAAAAATCAAACTGTTCCCAAGACAATGGGAATGAAGTAACATGTGGATTTGGGGATGGATATTTCATGCTTATTTTTGGGGCTATGCAAGTTCTTCTCTCACAGATACCCAACTTCCATAATATTCAATGGTTGTCAATTCTTGCAGCAATTATGTCCTTTGCTTATGCTTTCATAGGAATGGGGCTTTCTGTCGGGCAAGTCACAGAAAATGGACATGCTGAGGGTAGTATTGAAGGAATCCCTACTTCCAGTGGAATTGAAAAGTTATGGCTGGTTGCTCAAGCACTTGGTGACATAGCATTCTCCTATCCATTCTCAGTAATTCTTATTGAAATACAGGATACTTTGAAGTCGCCTCCACCAGAAAATGTAACCATGAAGAGGGCCTCAACAATATCAGTCATTGTCACAACATTTTTCTACCTCTGCTGTGGGTGTTTTGGATATGCAGCCTTTGGTAATGATACACCAGGAAACCTTTTAACAGGGTTTGCACTCTATAAAAAACATTGGCTTGTAGACTTTGCCAATGCTTGTATAGTAATTCACCTAGTTGGTGCATATCAGGTGTATAGCCAGCCACTTTTTGCCAATGTTGAGAATTGGCTTCGTTTCAAGTTCCCGGACAGTGAATTTGTGAATCGCACATACTCCTTGAAACTCCCTTTGCTGCCAGCTTTCCGGCTAAATTTTCTTAGGCTGACTTTCAGAACTGCATATGTTGCATCAACAACTGGGATTGCAATGATCTTTCCCTACTTCAATCAGATTTTGGGAGTTTTGGCTGGCATAATCTACTATCCATTATCTATATATTTTCCAGTGGAAATGTACTTGAGTCTGGGCAATATTGAAGCATGGACAGCTAAGTGGGTCATGCTTAGGACTTTTAGCATTGTTGGTTTTCTGGTGGGATTGTTCACTCTCGTTGGATCCATTGAAGGGATAGTATCTGCAAAACTAAGCTGA 1389 0.4212 MREEGSGYDSTPFLDTQYAECHVERTGTVWTAVAHIVTGVIGSGVLSLAWSIAQLGWIGGPLTIVFFAAITLLSSFLLSNTYRSPDPELGPHRSSSYLDAVNLHKGEGNSRFCAVFVNVSLYGFGIAYVITAAISMRAIQKSNCSQDNGNEVTCGFGDGYFMLIFGAMQVLLSQIPNFHNIQWLSILAAIMSFAYAFIGMGLSVGQVTENGHAEGSIEGIPTSSGIEKLWLVAQALGDIAFSYPFSVILIEIQDTLKSPPPENVTMKRASTISVIVTTFFYLCCGCFGYAAFGNDTPGNLLTGFALYKKHWLVDFANACIVIHLVGAYQVYSQPLFANVENWLRFKFPDSEFVNRTYSLKLPLLPAFRLNFLRLTFRTAYVASTTGIAMIFPYFNQILGVLAGIIYYPLSIYFPVEMYLSLGNIEAWTAKWVMLRTFSIVGFLVGLFTLVGSIEGIVSAKLS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0612 462 Pfam Transmembrane amino acid transporter protein 25 455 IPR013057 -
Gso18g0612 462 PANTHER OS05G0424000 PROTEIN-RELATED 11 461 - -
Gso18g0612 462 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 11 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0612 Gso-Chr18 6660404 6664394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0612 24 459 Organic Solute Cotransporters AT1G10010 50.227 2.22e-154 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0612 K24917 - gmx:100801302 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0612 18 6660404 6664394 Gso8g2783 8 45574061 45581399 GST
Gso18g0612 18 6660404 6664394 Gso14g0090 14 812582 815648 PCT
Gso18g0612 18 6660404 6664394 Gso2g2580 2 50043733 50046949 PCT
Gso14g0090 14 812582 815648 Gso18g0612 18 6660404 6664394 PCT
Gso2g2580 2 50043733 50046949 Gso18g0612 18 6660404 6664394 PCT