Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2558 ATGGTAGCCAAAATCAGGCAAAGTGCTGCTAACTCTCCAAATCCAACAAAACCAGTGGTTGGAGAGATTGACACCAGTCCACCTTTTCAATCTGTTAAAGATGCTGTTTCTCTATTTGGTGAAGGTGCTTTCTCTGGTGAAACACCTCCCAATGCTCCCATTAAGAAGGCCAAATCTTATTTTGCTGAGAGTGTTTGGGCAAAGGAGAGACAACTTCACTTAGCCCAGAAAGATCTGAAAAAATTAAAGGAACAACTAAAGAATGCAGAAACTACCAAAGCTCAAGTCCTGGTGGAGCTTGAAAAGGCTAAAAGAGTGGTTGAGGATCTCTCACAAAAGCTTAAAGTTCTCAGTGAATCCAGAGAATCAGCAATTCAGGCAACGGAAGCTTCAAAAAGTCAAGCAAAACAGCTTAAAGAAGAAAAATGTGGTGATCCTGATGGAACCAATCATGCTTGGAAAGAAGAGTTAGAAACTGCCGTTAATAATTTTGCATCTGTAATTACAGAACTTGATGTTGCAAAGCAAGAACTGAGTAAAATTCGTCAGGGGTATGATTTATCCTTGGAAGCAAGAGTTTCTGCTCTCAAGCAAACAGCAGAAGCTGAAGATGCAATGAAGGCAAACATGGAAAGAGCATGTGAGGTATCTAAAGAAATTTTGGTTGTGCAGGAATCAGTTGAGAAAATGAATGCTGAATCTGTCCAAGCACATCAACTGCAAGAAGAGACATTAGCCGGACAAAAAGTTCTTAGACAATCATATGAAGCCATCCTTGAAGAATCAAAAAAGAAGTTGCTTGATTTAAAGAAGGAATTTAATCCAGAGCTTATAAAAAATCTTGAAGTGCAGCTCACTGAGACAATGATTGAAATTGGGGTTTTGCAAAAGCAAATTGAAAACAAAAAGACATCAGACTTGGACTCTTTGAGAAGTGTCACTCAGGATCTTGGTGATGCTAAGGAATCACTGCAGAGAGTAACAGGACAGGAAGACACCCTTAGAAGCATGGTGGAAGCTCTTGGGATGGAGCTGGAGAATGTAAAAAGAGAACACTCTGAATTGAAGGAGAAAGAATCCAAAACTGAATCCATTGTTGAGAATCTGCAGGTAGAGCTCTGGAAAAGCGAGTTTGAACTTGAAGCCTACTTGGCAGGAGAATCTAAAGCTAGAGGCGCATCAGAGGAAATGATCTTGACATTGAAACAGTTGTTTTCTGAAACTGAAAATGCAAGGAGGGAAATAGAAGATATGAAAAATGAGACTGCAGAATTGAAGATGGAAGCTGCAGTCACTAAACTTGTGTTAGAAGATGCAGAAACAAAGCTTAGAGTAGCGGTGGAAGAAGTGGAAGCAGCTAATGCAGCAGAGGCAAGTGCTCTTGATCAGATTAAGGTCTTATCTATGAGAACTAGTCCTTCTCATTCATCACCTTCTGAACCTGGTGCAAGAATTACAATCTCAAGAGAGGAGTTTGAATCCTTAGTTCATAAGGTTGAGGAGTCTGATAAATTAGCAGATATCAAAGTGGCTGCTGCCACAGCACAGGTTGAAGCTGCAAAGGCCAGCGAAAATGAAGTTCTAAAGAGGTTAGAGGAAACTCAAAAGGAAATTGAGGATATGAAGAGTGAAACACAGGCAGCGTTGAAAAGGGCTGAAATGGCTGAAGCAGCAAAGAGGGCTGTGGAGGGTGAGCTCAGAAAGTGGCGCGAACGAGAGCAGAAGAAAGCAGCAGAAGCTGCATCTCAAATATTGGCTGAGACACTGATATCCCCAGAACTATCTCCTCAGCACTATAGGATTCAAATTCAGAATTCACCTCCAAACAGGGTGGAGATGAAGAAGTTAGAAAAGGGGAAGGTGTCAGTTTCAAAGAAAGTTCTCTTGCATAATATCAGTGGCATCTTTCACAGGAAAAGGAACCATGTTGAGGGAGAATCTTCTTCTTAG 1950 0.4108 MVAKIRQSAANSPNPTKPVVGEIDTSPPFQSVKDAVSLFGEGAFSGETPPNAPIKKAKSYFAESVWAKERQLHLAQKDLKKLKEQLKNAETTKAQVLVELEKAKRVVEDLSQKLKVLSESRESAIQATEASKSQAKQLKEEKCGDPDGTNHAWKEELETAVNNFASVITELDVAKQELSKIRQGYDLSLEARVSALKQTAEAEDAMKANMERACEVSKEILVVQESVEKMNAESVQAHQLQEETLAGQKVLRQSYEAILEESKKKLLDLKKEFNPELIKNLEVQLTETMIEIGVLQKQIENKKTSDLDSLRSVTQDLGDAKESLQRVTGQEDTLRSMVEALGMELENVKREHSELKEKESKTESIVENLQVELWKSEFELEAYLAGESKARGASEEMILTLKQLFSETENARREIEDMKNETAELKMEAAVTKLVLEDAETKLRVAVEEVEAANAAEASALDQIKVLSMRTSPSHSSPSEPGARITISREEFESLVHKVEESDKLADIKVAAATAQVEAAKASENEVLKRLEETQKEIEDMKSETQAALKRAEMAEAAKRAVEGELRKWREREQKKAAEAASQILAETLISPELSPQHYRIQIQNSPPNRVEMKKLEKGKVSVSKKVLLHNISGIFHRKRNHVEGESSS* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2558 649 Coils Coil 338 365 - -
Gso2g2558 649 Coils Coil 278 298 - -
Gso2g2558 649 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 4 634 - -
Gso2g2558 649 Coils Coil 514 572 - -
Gso2g2558 649 Coils Coil 223 243 - -
Gso2g2558 649 Coils Coil 401 428 - -
Gso2g2558 649 Coils Coil 252 272 - -
Gso2g2558 649 MobiDBLite consensus disorder prediction 1 26 - -
Gso2g2558 649 Coils Coil 65 141 - -
Gso2g2558 649 Coils Coil 436 456 - -
Gso2g2558 649 MobiDBLite consensus disorder prediction 134 148 - -
Gso2g2558 649 Pfam Weak chloroplast movement under blue light 22 575 IPR008545 -
Gso2g2558 649 MobiDBLite consensus disorder prediction 128 148 - -
Gso2g2558 649 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 4 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2558 Gso-Chr2 49880511 49883782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2558 - - gmx:100817643 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0643 18 7095687 7100753 Gso2g2558 2 49880511 49883782 PCT
Gso8g2738 8 45081788 45087595 Gso2g2558 2 49880511 49883782 PCT
Gso2g2558 2 49880511 49883782 Gso18g0643 18 7095687 7100753 PCT
Gso2g2558 2 49880511 49883782 Gso8g2738 8 45081788 45087595 PCT