Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0643 ATGGTAGCAAAAATCCGGCAAAGTGCTACTGAGTCTCCTAATCCAAAACCTGAGGTTGGAGAGATTGACACCAGCCCACCTTTTCAGTCTGTTAAAGATGCTGTCTCTCTATTTGGTGAAGGTGCTTTCTCTGGTGAAAAACCTATCTTTAAGAAGGCAAAACCTTATTCTGCTGAGAGAGTTTTGGCCAAGGAGACACAACTTCATGTTGCCCAAAAAGAGCTGAACAAGTTAAGGGAACAAGTAAAGAATGCTGAAACTACTAAGGCTCAAGCTCTTGTGGAGCTTGAAAGGGCTAAAAGGACAGTTGAGGATCTGACACAAAAGATAAAAGTTATCAGCGATTCTAGGGAGTTGGCAATTGAGGCAACAGAAGCTGCCAAGAGTCAGGCAAAACAGCTTACGGAAGAAAAGTATGGTGTCCCTGATGGAACAAATGTTGCTTGGAAGGAAGAGTTAGAAGCTGCTGTTAAAAGGTATGCATCTGTCATGACAGAACTTGATGCTGCAAAGCAAGCACTGAGCAAGACTCGGCAAGAGTATGATTCATCCTTGGATGCAAAAAAGTCTGCTTTCAAGCTAGCAGCAGAAGCTGGAGATGCATCAAAGGAAAACACAGAAAGAGCATCTGAGCTTTCTAAAGAAATTTCAGCTGTAAAGGAGTCAATTGAGCAAGCAAAGCTTGCTTCTATTGTAGCACAGCAACAGCAAACAATGATTTTAGCTGAGAAAGATGTTCTAAGACAATCATATAAAGCTACCTTGGAACAATCTGAAAAGAAATTGCTTGCTTTAAAGAAGGAATTCAGTCCCGAGCTTGCCAAAAATCTTGAAATGCAGCTGGCAGAGACAATGTCTGAAATTGGGACGCTGCAAAAGGAAATGGAAAATAAAAGAACATCGGACTTGGACTCCGTGAAAAGTGTCACTTTGGAGCTAGATGATGCTAAGGAGTCTTTGCAGAAAGTAGCAGATGAGGAAAGCTCTCTTAGAAGCTTGGTGGAATCTCTTAAGGTAGAACTGGAGAATGTAAAAAGAGAACATTCTGAATTGCAGGACAAAGAATCTGAGACTGAATCCATTGTGGGGAATCTGCATGTCAAGCTCCGCAAATGCAAGTCTGAGCTTGAAGCCTGCATGGCAGAAGAATCTAAAGTTAGAGGTGCATCTGAGGAAATGATCTTGACACTTAGCCAGCTGACATCTGAAACTGAAAATGCAAGGCGGGAAGCAGAAGATATGAAGAACAGGACAGCAGAATTAAAGAAGGAAGTTGAAGTTACCATGCTTGCATTAGAAGAAGCAGAAAAAAATCTTAAAGTGGCGCTGGAAGAAGCAGAAGCAGCAAAAGCAGCTGAGAAAAGTGCTCTTGACCAGATTACGATTTTAACCGAAAGGACTACTGCTGCACGTGCATCAACATCTGAATCTGGTGCTGTGATTACGATCTCAAAGGAGGAGTTTGACTCGCTAAGCCATAAAGTTGAGGAGTCTGATAAATTAGCAGATATGAAAGTGGCTGCTGCCAAGGCACAGGTTGAAGCTGTGAAGGCTAGTGAAAATGAGGCTCTCAAAAGGTTGGAGACAACTCAAAAGGAGATTGAGGATATAAAGACTGCAACCCAGGAGGCTTTGAAAAAGGCTGAAATGGCTGAAGCAGCGAAAAGGGCAGTGGAGAGTGAGCTTCGAAGATGGCGCGAGAGGGAGCAGAAGAGGGCCGCAGAAGCTGCATCTCGAATTCTGGCTGAAACACAGGTGTCAACAGAATCGTCTCCTCAGCACTATAGGATTCAAAAGCAGAATCCTCCTCGTACAATGGTGGAGGTGAAAAAGTTTGAAAAGGAGAAGGTTTCAGTTTCAAAGAAAACCCTCTTGCCAAATATTAGTGGCATCTTCCAAAGGAAAAAGAACCAGGTTGAGGGTGGTTCTCCTTCTTATCTGCCTGGTGAGAACCCTGTATGA 1962 0.4317 MVAKIRQSATESPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPIFKKAKPYSAERVLAKETQLHVAQKELNKLREQVKNAETTKAQALVELERAKRTVEDLTQKIKVISDSRELAIEATEAAKSQAKQLTEEKYGVPDGTNVAWKEELEAAVKRYASVMTELDAAKQALSKTRQEYDSSLDAKKSAFKLAAEAGDASKENTERASELSKEISAVKESIEQAKLASIVAQQQQTMILAEKDVLRQSYKATLEQSEKKLLALKKEFSPELAKNLEMQLAETMSEIGTLQKEMENKRTSDLDSVKSVTLELDDAKESLQKVADEESSLRSLVESLKVELENVKREHSELQDKESETESIVGNLHVKLRKCKSELEACMAEESKVRGASEEMILTLSQLTSETENARREAEDMKNRTAELKKEVEVTMLALEEAEKNLKVALEEAEAAKAAEKSALDQITILTERTTAARASTSESGAVITISKEEFDSLSHKVEESDKLADMKVAAAKAQVEAVKASENEALKRLETTQKEIEDIKTATQEALKKAEMAEAAKRAVESELRRWREREQKRAAEAASRILAETQVSTESSPQHYRIQKQNPPRTMVEVKKFEKEKVSVSKKTLLPNISGIFQRKKNQVEGGSPSYLPGENPV* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0643 653 Coils Coil 274 294 - -
Gso18g0643 653 Pfam Weak chloroplast movement under blue light 21 572 IPR008545 -
Gso18g0643 653 MobiDBLite consensus disorder prediction 630 653 - -
Gso18g0643 653 MobiDBLite consensus disorder prediction 583 604 - -
Gso18g0643 653 Coils Coil 150 180 - -
Gso18g0643 653 Coils Coil 510 568 - -
Gso18g0643 653 Coils Coil 248 268 - -
Gso18g0643 653 Coils Coil 306 361 - -
Gso18g0643 653 MobiDBLite consensus disorder prediction 583 600 - -
Gso18g0643 653 Coils Coil 61 137 - -
Gso18g0643 653 MobiDBLite consensus disorder prediction 1 27 - -
Gso18g0643 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 630 - -
Gso18g0643 653 Coils Coil 209 229 - -
Gso18g0643 653 Coils Coil 397 452 - -
Gso18g0643 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 3 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0643 Gso-Chr18 7095687 7100753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0643 - - gmx:100794569 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0643 18 7095687 7100753 Gso8g2738 8 45081788 45087595 GST
Gso18g0643 18 7095687 7100753 Gso2g2558 2 49880511 49883782 PCT
Gso2g2558 2 49880511 49883782 Gso18g0643 18 7095687 7100753 PCT