Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2086 ATGGCTCTGCATTTTCTTCTCCTCCTGCTTTTTGCAGTGTCTTTTGTTGCTGCTGATGAAGAACCATTTATAGGAGTGAATATTGGAACAGATCTCTCTGATATGCCACACCCTACTCAAGTAGTAGCTCTACTTAAAGCCCAACAAATTCGTCATGTTCGTTTGTATGATGCAGACCAAGCTATGCTCCTTGCACTTGCAAAGACAGGCATTCAGGTTGTTGTGACTGTCCCAAATGAAGAGATCCTGGCAATTGGTCAATCGAATTCCACGGCTGCCAATTGGGTTTCCCGCAACGTGGTAGCACATTATCCAGCCACCAATATCACAGCCATTTGTGTTGGTTCTGAGGTTTTAACTACCCTCCCGAATGCGGCAAAAGTACTTGTCAGTGCGATTAAATACATCCATTCAGCCCTTGTGGCATCCAATCTTGATCGCCAAGTTAAAGTTTCAACACCCCTTTCCTCATCCATCATTCTTGATTCATTTCCACCTTCTCAGGCTTTCTTTAACCGCTCACTCAATCCAGTTTTAGTCCCACTACTTGATTTCTTGCAATCCACTGGCTCTTATCTGATGCTAAACATATACCCTTACTATGACTACATGCAATCAAATGGAGTGATTCCATTAGATTATGCACTTTTCAAATCTCTCCCTCCAAACAAAGAAGCTGTTGATTCCAATACCCTCCTCCACTACACCAATGTCTTTGATGCCATGGTTGATGCTGCATACTTTGCCATAGCTTTTCTAAATTACACCAACATTCCTGTTGTGGTGACTGAGTCAGGGTGGCCCTCAAAAGGTGGCTCCAACGAACCTGATGCAACGGTGGACAATGCAAATACTTACAACAGCAATTTGATCAAACATGTGTTTAACAAAACCGGAACTCCCAAACATCCTGGAATTGCTGTTAGTACTTACATCTATGAGCTCTACAACGAGGATATGAAGCCTGGGCCATTGTCAGAGAAGAACTGGGGACTGTTTGATGCAAATGGAACACCTATTTACATTCTACACTTGACAGAGTCAGGGGCAGTCTTAGCAAATGATACCAGCAACAATACTTTCTGCATTGCAAAGGACGGTGCTGACCCGAAGATGCTGCAGGCTGCACTAGATTGGGCATGTGGACCGGGCAAGGTCGAATGCTCTCCATTGCTGCAGGGGCAACCATGCTATGAACCGGACAATGTGATTGCACATGCAAATTATGCATTTGACACTTACTATCATAAGATGGGAAAGACTCCTGATGCATGTGACTTCAATGGAGTGGCTACTATCTCCACCTCAGATCCAAGTCATGGTTCTTGTTTATTTCCTGGAAGTGTTGGCAAAAATGGAACCTTAGGTAACTTCACAGCTCCATCCATGAATTCTACAAATTCAGATTCCTCAGCCTACAAATTCAGCTCTGACTTGAGAATTAGAAGCCTTTTAATGGTAGCAGGATTTCTATTATGGGGAGTGGTTTTGCTATAA 1497 0.4342 MALHFLLLLLFAVSFVAADEEPFIGVNIGTDLSDMPHPTQVVALLKAQQIRHVRLYDADQAMLLALAKTGIQVVVTVPNEEILAIGQSNSTAANWVSRNVVAHYPATNITAICVGSEVLTTLPNAAKVLVSAIKYIHSALVASNLDRQVKVSTPLSSSIILDSFPPSQAFFNRSLNPVLVPLLDFLQSTGSYLMLNIYPYYDYMQSNGVIPLDYALFKSLPPNKEAVDSNTLLHYTNVFDAMVDAAYFAIAFLNYTNIPVVVTESGWPSKGGSNEPDATVDNANTYNSNLIKHVFNKTGTPKHPGIAVSTYIYELYNEDMKPGPLSEKNWGLFDANGTPIYILHLTESGAVLANDTSNNTFCIAKDGADPKMLQAALDWACGPGKVECSPLLQGQPCYEPDNVIAHANYAFDTYYHKMGKTPDACDFNGVATISTSDPSHGSCLFPGSVGKNGTLGNFTAPSMNSTNSDSSAYKFSSDLRIRSLLMVAGFLLWGVVLL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2086 498 Gene3D Glycosidases 23 350 - -
Gso2g2086 498 SUPERFAMILY (Trans)glycosidases 24 343 IPR017853 -
Gso2g2086 498 Pfam Glycosyl hydrolases family 17 24 343 IPR000490 GO:0004553|GO:0005975
Gso2g2086 498 Gene3D - 354 446 - -
Gso2g2086 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Gso2g2086 498 Pfam X8 domain 361 432 IPR012946 -
Gso2g2086 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 7 487 - -
Gso2g2086 498 SMART X8_cls 360 445 IPR012946 -
Gso2g2086 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 7 487 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2086 Gso-Chr2 45466239 45469288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2086 18 487 Glycoside Hydrolase AT1G66250 73.941 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2086 K19891 - gmx:100792634 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1807 14 50425448 50428534 Gso2g2086 2 45466239 45469288 GST
Gso18g0358 18 3424177 3428079 Gso2g2086 2 45466239 45469288 PCT
Gso13g1255 13 27802578 27806613 Gso2g2086 2 45466239 45469288 PCT