Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1570 ATGTCTAGCTCAGCAAAAGTTTTGGATCCTGCATTCCAGGGAGTTGGTCAAAGAGTAGGAACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCATTGCCCAAATCTGAGTATGGGAAATTCTACATGGGAGATTCGTACATCATCTTGCAGACAACTCAAGGCAAAGGAAGCACTTATTTTTATGATTTACACTTTTGGATTGGAAAGCATACAAGTCAGGATGAGGCTGGAACTGCGGCCATTAAAACTGTTGAACTTGATGCTGCTATTGGAGGGCGTGCAGTGCAGCACAGGGAAATCCAAGGGCATGAGTCTGACAAGTTTTTGTCATACTTTAAACCATGTATTATACCATTGGAGGGTGGAGTTGCATCTGGGTTTAAAAAACCTGAAGAAGAGAAGTTTGAAACATGTTTGTATGTATGCAGAGGGAAAAGAGTTGTTAGATTGAGACAGGTCCCTTTTGCAAGGTCTTCATTGAACCATGAAGATGTATTCATACTAGACACTCAGAATAAGATTTATCAATTCAATGGTGCAAATTCCAATATTCAAGAAAGAGCCAAGGCTTTGGAAGTTATACAGTTTCTGAAAGAAAAATATCATGAAGGGAAATGTGATGTTGCAATTGTTGATGATGGAAAATTAGACACTGAGTCAGACTCAGGTGAGTTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATTAGTGAGGATGATATTATTCCAGAGACAATTCCTGCTCAGCTTTATAGTATTGTTGATGGTGAGGTCAAGCCTGTGGAAGGTGAACTTTCTAAATCACTGTTGGAAAACAACAAATGCTATTTACTGGACTGTGGTGCCGAGATGTTTGTCTGGGTTGGTCGCGTGACACAAGTTGAAGAACGAAAAGCAGCCTGCCAAGCCGTTGAGGAGTTTGTTGCTAGTCAAAATAGGCCAAAGTCTACAAGGATAACCCGGATTATTCAAGGTTATGAGACGCATTCATTTAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTAGTACCAATGCTGAGGAAGGAAGAGGAAAAGTTGCAGCATTGCTTAAGCAACAAGGCATGGGTGTCAAAGGAATGACAAAAAGTACCCCTGTAAATGAGGAAATTCCACCTTTGCTTGAAGGAGATGGGAAGATAGAGGTATGGCGAATCAATGGAAATGCCAAGACTGCATTGCCGAAGGAGGAGATTGGTAAATTTTATAGTGGAGATTGCTACATTGTATTGTACACCTACCATTCTGGTGAGCGGAAAGAAGACTACTTCGTGTGCTGTTGGTTTGGCAAAGACAGTGTTGAGGAGGACCAAACAACAGCTACTAGGTTAGCCAATACAATGTCTACCTCATTAAAGGGTAGACCTGTACAGGGTCGCATATTTGAAGGCAAAGAGCCGCCACAGTTTGTTGCTATTTTCCAACCAATGGTGGTTCTCAAGGGAGGGTTGAGCTCTGGATACAAGAAATTAATGGCAGACAAAGGTGCATCAGATGAGACATACACAGCAGAGAGTATTGCACTTATTCGAATTTCTGGAACTTCTATTCATAACAATAAATCAGTACAAGTTGATGCAGTGCCATCATCATTGAATTCTACTGAGTGTTTTGTCCTGCAATCTGGCTCTACAATTTTCACTTGGCATGGAAATCAGTGTTCCTTTGAGCAGCAACAGCTAGCAGCAAAGGTTGCTGATTTTTTACGGCCAGGAGCTACTTTAAAGCATGCTAAAGAAGGAACAGAAAGCTCAGCTTTCTGGTCTGCACTAGGAGGAAAACAAAGTTACACCAGCAAGAAAGTTGTTAACGAGTTTGTCAGAGATCCACATTTGTTCACTATATCATTTAATAAAGGAAAGTTCAATGTAGAGGAGGTTTACAACTTCTCTCAAGATGACCTGTTGCCGGAGGATATCCTTATACTTGACACACATGTAGAAGTGTTTATTTGGATTGGTCATTCTGTGGACCCAAAGGAAAAGCAAAATGCTTTTGATATCGGCCAGAAATACATAGATTTGGCTGCATCTCTGGAGGAACTATCTCCACATGTACCACTATATAAAGTAACAGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTTCATGGGATCATGCAAAAGCTATGGTTCTGGGGAACTCATTTCAGAAAAAAGTGTCACTACTCTTTGGATTTGGCCATGCTGTGGAGGAAAAGTCGAATGGGTCAAGTCTAGGGGGACCAAGACAAAGAGCAGAAGCCTTGGCTGCCTTATCTAATGCATTTAGTTCATCTTCTGAGAAAGCATCCAGTTTGGCACAAGATAGATTGAATGGGTTAGGCCAAGGAGGACCAAGACAAAGGGCAGAAGCTTTAGCCGCTTTAAACTCTGCATTTAGTTCATCATCTGGGACGAAGACTTTTACTCCTAGGCCATCTGGAAGAGGTCAAGGATCACAAAGAGCTGCAGCAGTGGCTGCTCTTTCACAAGTTCTTACGGCCGAAAAGAAAAAATCACCTGATGGTTCTCCTGTTGCTAGCAGGAGTCCTATCACTCAAGGTAGCGCTACTGAAACTAAAAGTGACTCCTCTGAAGTTGAAGAAGTTGCAGAAGCCAAGGAAACAGAGGAACTCCCCCCTGAGACAGGTAGCAATGGGGATTTGGAACCAAAACAAGAAAATGTGGAGGAAGGAAATGATGGTCAAAGGACGTTCAGTTATGAACAATTAAAGACTAAATCTGGTCGTAATGTGCCTGGAATTGATCTTAAACGGAGAGAGGCCTATCTGTCAGAAGAGGAGTTCAACACTGTATTTGGAATGACAAAAGAAGCATTTTACAAGTTGCCAAGATGGAAGCAAGACATGCTGAAAAAGAAATACGAATTGTTCTAG 2922 0.4172 MSSSAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGSTYFYDLHFWIGKHTSQDEAGTAAIKTVELDAAIGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEKFETCLYVCRGKRVVRLRQVPFARSSLNHEDVFILDTQNKIYQFNGANSNIQERAKALEVIQFLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPETIPAQLYSIVDGEVKPVEGELSKSLLENNKCYLLDCGAEMFVWVGRVTQVEERKAACQAVEEFVASQNRPKSTRITRIIQGYETHSFKSNFDSWPSGSASTNAEEGRGKVAALLKQQGMGVKGMTKSTPVNEEIPPLLEGDGKIEVWRINGNAKTALPKEEIGKFYSGDCYIVLYTYHSGERKEDYFVCCWFGKDSVEEDQTTATRLANTMSTSLKGRPVQGRIFEGKEPPQFVAIFQPMVVLKGGLSSGYKKLMADKGASDETYTAESIALIRISGTSIHNNKSVQVDAVPSSLNSTECFVLQSGSTIFTWHGNQCSFEQQQLAAKVADFLRPGATLKHAKEGTESSAFWSALGGKQSYTSKKVVNEFVRDPHLFTISFNKGKFNVEEVYNFSQDDLLPEDILILDTHVEVFIWIGHSVDPKEKQNAFDIGQKYIDLAASLEELSPHVPLYKVTEGNEPCFFTTYFSWDHAKAMVLGNSFQKKVSLLFGFGHAVEEKSNGSSLGGPRQRAEALAALSNAFSSSSEKASSLAQDRLNGLGQGGPRQRAEALAALNSAFSSSSGTKTFTPRPSGRGQGSQRAAAVAALSQVLTAEKKKSPDGSPVASRSPITQGSATETKSDSSEVEEVAEAKETEELPPETGSNGDLEPKQENVEEGNDGQRTFSYEQLKTKSGRNVPGIDLKRREAYLSEEEFNTVFGMTKEAFYKLPRWKQDMLKKKYELF* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1570 973 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Gso2g1570 973 Gene3D Severin 249 359 IPR029006 -
Gso2g1570 973 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
Gso2g1570 973 MobiDBLite consensus disorder prediction 854 869 - -
Gso2g1570 973 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Gso2g1570 973 ProSiteProfiles Headpiece (HP) domain profile. 908 973 IPR003128 GO:0003779|GO:0007010
Gso2g1570 973 MobiDBLite consensus disorder prediction 908 922 - -
Gso2g1570 973 Pfam Gelsolin repeat 635 713 IPR007123 -
Gso2g1570 973 Pfam Gelsolin repeat 411 483 IPR007123 -
Gso2g1570 973 Pfam Gelsolin repeat 534 583 IPR007123 -
Gso2g1570 973 Pfam Gelsolin repeat 152 217 IPR007123 -
Gso2g1570 973 Pfam Gelsolin repeat 29 111 IPR007123 -
Gso2g1570 973 Pfam Gelsolin repeat 264 337 IPR007123 -
Gso2g1570 973 Gene3D Villin headpiece domain 896 973 IPR036886 GO:0003779|GO:0007010
Gso2g1570 973 SMART VHP_1 938 973 IPR003128 GO:0003779|GO:0007010
Gso2g1570 973 PANTHER VILLIN-3-LIKE ISOFORM X1 1 973 - -
Gso2g1570 973 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Gso2g1570 973 Pfam Villin headpiece domain 938 973 IPR003128 GO:0003779|GO:0007010
Gso2g1570 973 CDD gelsolin_S4_like 386 487 - -
Gso2g1570 973 MobiDBLite consensus disorder prediction 870 889 - -
Gso2g1570 973 Gene3D Severin 133 246 IPR029006 -
Gso2g1570 973 Gene3D Severin 388 518 IPR029006 -
Gso2g1570 973 MobiDBLite consensus disorder prediction 808 930 - -
Gso2g1570 973 CDD gelsolin_S2_like 141 232 - -
Gso2g1570 973 CDD gelsolin_S5_like 519 609 - -
Gso2g1570 973 Gene3D Severin 5 132 IPR029006 -
Gso2g1570 973 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
Gso2g1570 973 CDD gelsolin_S3_like 254 343 - -
Gso2g1570 973 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Gso2g1570 973 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Gso2g1570 973 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Gso2g1570 973 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Gso2g1570 973 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Gso2g1570 973 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Gso2g1570 973 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Gso2g1570 973 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Gso2g1570 973 CDD gelsolin_S6_like 622 720 - -
Gso2g1570 973 MobiDBLite consensus disorder prediction 808 825 - -
Gso2g1570 973 CDD gelsolin_S1_like 12 124 - -
Gso2g1570 973 SMART VILL_6 139 234 IPR007122 GO:0051015
Gso2g1570 973 SMART VILL_6 19 117 IPR007122 GO:0051015
Gso2g1570 973 SMART VILL_6 392 490 IPR007122 GO:0051015
Gso2g1570 973 SMART VILL_6 624 719 IPR007122 GO:0051015
Gso2g1570 973 SMART VILL_6 251 344 IPR007122 GO:0051015
Gso2g1570 973 SMART VILL_6 518 607 IPR007122 GO:0051015
Gso2g1570 973 PANTHER VILLIN 1 973 IPR007122 GO:0051015
Gso2g1570 973 SUPERFAMILY Actin depolymerizing proteins 511 612 - -
Gso2g1570 973 SUPERFAMILY VHP, Villin headpiece domain 905 973 IPR036886 GO:0003779|GO:0007010
Gso2g1570 973 Gene3D Severin 519 614 IPR029006 -
Gso2g1570 973 Gene3D Severin 615 729 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1570 Gso-Chr2 34200603 34215826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1570 - - gmx:100788765 1895.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1162 19 39902261 39915310 Gso2g1570 2 34200603 34215826 PCT
Gso3g1164 3 37148350 37161548 Gso2g1570 2 34200603 34215826 PCT
Gso2g1570 2 34200603 34215826 Gso19g1162 19 39902261 39915310 PCT
Gso2g1570 2 34200603 34215826 Gso3g1164 3 37148350 37161548 PCT