Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1550 ATGGGAGAAGCACCTACATTCATACCTCAAGACCTGCAGAATGGAACATGCAATGGGTTTGAATTAAAAAGTGGGACTTTTGAAACTGATACTATTGTTGGCAATAAAAAGTATGTCATTGGTGGAACCTATGGTGAAACCTTTTCGGTTAAAGATCAAATTCTTGACAACAATGGTCTCGGGGAATGGGTTGATCTCATTCAGCTAGGTACCAAACCCATTTCATGCAATGGCCACTCAGCCGTGCTTTTGAAAGACCGAATACTAATTCTTAAGAAAAATGCCAAGCCAGATGATTGTATATGGTTTCTGGAGGTGGACACTCCATATGTCAGGCAGCAGAAAAAAATTTTGGGGATTGATGTTGTTGCATGGAGTAAGGGTGTGATAGGAAATGCTGAGAAACCTGTTGTTATCAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATATCTATGCTGATGACGGAATTCCCCTCTATGTTTGGTTTCTCTGTGAGCCACACAACCCGTGCTGCAAGAGGCATGGAGAAAGATGGGGTCCATTACCATTTTACAGAGAAGAATGTTATGGAGAAAGAAATTAAAGATGGAAAGTTTCTGGAGTTTGCTTCTGTCCATGGTAATTTATACGGGACCAGTGTTGAGGCTGTGGAGATGGTATCAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGAGCAAGATCTGTGAGGGCTAGTTCTCTAGAAGCCATGTTCATCTTTATCTGCCCCCCATCAATGGAAGAGCTGGAGAAACGTCTTCGTGACCGAGGGACAGAGACAGAAGAACAGGTCCTAAAGCGGTTACGAAATGCTCAGGCTGAGATTGAGCAAGGGAAGTCATCAGGCATATTTGATCACATCTTATATAATGGCAAACTTGAAGAGTGTTACGAGAATCTGAAGAAATTATTGGGACTTGATGGATATGTCACTCCTCCCAAGTCAGCACCAAAAAAGATGAATCTCCCAAGGGATCATTCAGTGTCAAAAATTGATGACAAAATCATCATAGGCTGCATCTCTTCAGGACTAGAAAAGGAATCAAAGAACTTGATCATGTTAGATGTCTCCTCACTTAAAGGGGGCGCGCCCGGACGGACAAGAGGGCTAGATTTTCAAGTCATTGACTCGTTTTCAGATGGCTTCAATGGCAATGAACCATTTTGA 1200 0.4225 MGEAPTFIPQDLQNGTCNGFELKSGTFETDTIVGNKKYVIGGTYGETFSVKDQILDNNGLGEWVDLIQLGTKPISCNGHSAVLLKDRILILKKNAKPDDCIWFLEVDTPYVRQQKKILGIDVVAWSKGVIGNAEKPVVISGPSGVGKGTLISMLMTEFPSMFGFSVSHTTRAARGMEKDGVHYHFTEKNVMEKEIKDGKFLEFASVHGNLYGTSVEAVEMVSDAGKRCILDIDVQGARSVRASSLEAMFIFICPPSMEELEKRLRDRGTETEEQVLKRLRNAQAEIEQGKSSGIFDHILYNGKLEECYENLKKLLGLDGYVTPPKSAPKKMNLPRDHSVSKIDDKIIIGCISSGLEKESKNLIMLDVSSLKGGAPGRTRGLDFQVIDSFSDGFNGNEPF* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1550 399 Pfam Guanylate kinase 134 315 IPR008145 -
Gso2g1550 399 SUPERFAMILY Galactose oxidase, central domain 31 114 IPR011043 -
Gso2g1550 399 ProSitePatterns Guanylate kinase-like signature. 169 186 IPR020590 -
Gso2g1550 399 SMART gk_7 133 319 IPR008145 -
Gso2g1550 399 ProSiteProfiles Guanylate kinase-like domain profile. 134 316 IPR008144 -
Gso2g1550 399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 315 IPR027417 -
Gso2g1550 399 PANTHER GUANYLATE KINASE-RELATED 1 338 - -
Gso2g1550 399 Gene3D - 130 318 IPR027417 -
Gso2g1550 399 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 338 - -
Gso2g1550 399 CDD GMPK 136 255 - -
Gso2g1550 399 TIGRFAM guanyl_kin: guanylate kinase 135 315 IPR017665 GO:0004385|GO:0006163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1550 Gso-Chr2 33076676 33080165 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1550 K00942 - gmx:100812658 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1178 19 40179776 40183772 Gso2g1550 2 33076676 33080165 PCT
Gso3g1179 3 37344844 37348601 Gso2g1550 2 33076676 33080165 PCT
Gso2g1550 2 33076676 33080165 Gso19g1178 19 40179776 40183772 PCT
Gso2g1550 2 33076676 33080165 Gso3g1179 3 37344844 37348601 PCT