Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1543 ATGACTGCAGTTGTGGTCGTCCCATTGGGCCTTCTCTTCTTCGCTTCCGGCCTCATCGTTAACCTCATTCAGGCAATATGCTACGTGGTTGTGCGGCCGGTGTCAAAGAATTTGTACCGGCGGATGAACAGGGTGGTGGCTGAACTGCTGTGGCTGGAGCTCGTTTGGATTATTGATTGGTGGGCTGGTGTTAAGGTCCAAGTATTCACAGATCCTGAAACCTTTCATTCAATGGGTAAAGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGCAGCACACTTGCTGTGATGAAGAAATCTTCAAAGTTTCTACCGGTCATTGGTTGGTCAATGTGGTTTTCTGAATATCTTTTCCTGGAGAGAAGTTGGGCCAAGGATGAACGCACATTAAAGTCAGGCCTACAGCAACTGAGGGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACTCGCTTTACCCAGGCCAAACTATTAGCTGCTCAGGAGTATGCAGCCTCAGCTGGATTGCCTGTTCCAAGAAATGTTTTGATTCCAAGAACTAAGGGTTTTGTTTCAGCAGTAAACCATATGCGCTCGTTTGTTCCTGCCATTTATGATGTAACTGTGGCAATTCCCAAGAGTTCACCTGCTCCTACAATGCTAAGACTCTTCAGAGGGAAATCTTCATTGGTGCATGTGCATATTAAGCGGCATGCGATGAAGGATTTGCCAGAAGAAGATGAAGCTGTTGCTCAATGGTGTCGAGATGTGTTTGTGGCTAAGGATGCATTGTTAGACAAACATATAGCTGAGGACACATTTAGTGATCAAGAGCTGCAGGATACTGGTCGACCCATAAAGTCTCTTGTGGTTGTCATATTGTGGGCTTGTGTCGTTGTTACGGGGGTCGTAAAGTTCCTCCAATGGTCTTCACTACTATCCTCCTGGAAGGGTGTTGCATTTTCAGCATTTGGTTTGGGAGTTGTCACTCTACTCATGCACATCTTGATCATGTTCTCACAATCTGAGCGTTCAACCCCTTCCAAGGTTGCCCCTACAAAAAAGTCCAAGAATAGCGAACAACTGGAAGCTAGGGATAACAAACAAGACTAG 1155 0.4589 MTAVVVVPLGLLFFASGLIVNLIQAICYVVVRPVSKNLYRRMNRVVAELLWLELVWIIDWWAGVKVQVFTDPETFHSMGKEHALVISNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDERTLKSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYAASAGLPVPRNVLIPRTKGFVSAVNHMRSFVPAIYDVTVAIPKSSPAPTMLRLFRGKSSLVHVHIKRHAMKDLPEEDEAVAQWCRDVFVAKDALLDKHIAEDTFSDQELQDTGRPIKSLVVVILWACVVVTGVVKFLQWSSLLSSWKGVAFSAFGLGVVTLLMHILIMFSQSERSTPSKVAPTKKSKNSEQLEARDNKQD* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1543 384 Coils Coil 368 384 - -
Gso2g1543 384 Pfam Acyltransferase C-terminus 237 309 IPR032098 -
Gso2g1543 384 MobiDBLite consensus disorder prediction 357 384 - -
Gso2g1543 384 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 373 - -
Gso2g1543 384 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 1 373 - -
Gso2g1543 384 Pfam Acyltransferase 73 225 IPR002123 GO:0016746
Gso2g1543 384 SMART plsc_2 83 205 IPR002123 GO:0016746
Gso2g1543 384 CDD LPLAT_LCLAT1-like 55 250 - -
Gso2g1543 384 MobiDBLite consensus disorder prediction 370 384 - -
Gso2g1543 384 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 60 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1543 Gso-Chr2 32816730 32824621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1543 1 382 Miscellaneous Gene Families AT3G57650 74.935 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1543 K13523 - gmx:100805704 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1186 19 40274569 40285110 Gso2g1543 2 32816730 32824621 PCT
Gso3g1189 3 37444938 37452185 Gso2g1543 2 32816730 32824621 PCT
Gso2g1543 2 32816730 32824621 Gso19g1186 19 40274569 40285110 PCT
Gso2g1543 2 32816730 32824621 Gso3g1189 3 37444938 37452185 PCT