Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1272 ATGGACCTAATCACCAGCATGGTAGCTGAAAGGCCCGTGGTGATCTTCAGCAAGAGCACATGTTGCTTGAGCCACTCCATGACCACACTGATACGTAGCTTTGGTGCAAACCCTACTATTTATGAGCTTGATGAAATGACAAATGGGCAACAGATTGAAAGTGCACTGCTTCAAATGGGGTGCCAGCCAAGTGTACCTGCTGTCTTTATAGGACAACAATTCATTGGTGGATCTAAGAGAGTTATGAGCCTGCACCTTAGGAATGAGTTAGTACCAAAGCTCATAAATGCTAGAGCAATATGGATTTGA 309 0.4434 MDLITSMVAERPVVIFSKSTCCLSHSMTTLIRSFGANPTIYELDEMTNGQQIESALLQMGCQPSVPAVFIGQQFIGGSKRVMSLHLRNELVPKLINARAIWI* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1272 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Gso2g1272 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Gso2g1272 102 Pfam Glutaredoxin 13 75 IPR002109 -
Gso2g1272 102 Gene3D Glutaredoxin 2 100 - -
Gso2g1272 102 SUPERFAMILY Thioredoxin-like 2 101 IPR036249 -
Gso2g1272 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 102 IPR011905 -
Gso2g1272 102 CDD GRX_GRXh_1_2_like 12 93 - -
Gso2g1272 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 101 - -
Gso2g1272 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Gso2g1272 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Gso2g1272 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1272 Gso-Chr2 15765595 15766248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1272 1 102 Miscellaneous Gene Families AT4G15690 55.882 2.71e-41 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1272 K03676 - gmx:100811394 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1272 2 15765595 15766248 Gso2g1272 2 15765595 15766248 ECH
Gso2g1272 2 15765595 15766248 Gso10g0182 10 1901491 1902006 GST
Gso19g1741 19 46284663 46285367 Gso2g1272 2 15765595 15766248 PCT
Gso3g1775 3 43528172 43528876 Gso2g1272 2 15765595 15766248 PCT
Gso2g1272 2 15765595 15766248 Gso19g1742 19 46292709 46293503 PCT
Gso2g1272 2 15765595 15766248 Gso3g1776 3 43534486 43535545 PCT