Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0182 ATGGACCTAATCACAAACATGGTAACTGAAAAGCCTGTGGTGATCTTCAGCAAGAGCACATGCTGCATGAGCCACTCCATCAAGTCACTGATACTTAGCTTTGGCGCAAGCCCCACAGTTTATGAGCTTGATGAAATGACAAATGGCCAACAGATTGAAAGGGAACTGCTTCAAATGGGGTGTCAGCCAAGTGTACCAGCTGTGTTTATAGGACAGCAATTTATTGGTGGCCCCCAAAGTGTCACGAGTCTGCATATTCGGAATGAGTTAGCACCACTGCTGCTCTAA 288 0.4618 MDLITNMVTEKPVVIFSKSTCCMSHSIKSLILSFGASPTVYELDEMTNGQQIERELLQMGCQPSVPAVFIGQQFIGGPQSVTSLHIRNELAPLLL* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0182 95 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 94 IPR011905 -
Gso10g0182 95 Gene3D Glutaredoxin 2 95 - -
Gso10g0182 95 Pfam Glutaredoxin 13 75 IPR002109 -
Gso10g0182 95 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 95 - -
Gso10g0182 95 PANTHER GLUTAREDOXIN 1 95 IPR011905 -
Gso10g0182 95 CDD GRX_GRXh_1_2_like 12 93 - -
Gso10g0182 95 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Gso10g0182 95 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Gso10g0182 95 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Gso10g0182 95 ProSiteProfiles Glutaredoxin domain profile. 1 95 - -
Gso10g0182 95 SUPERFAMILY Thioredoxin-like 1 94 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0182 Gso-Chr10 1901491 1902006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0182 1 94 Miscellaneous Gene Families AT4G15690 55.319 1.48e-37 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0182 K03676 - gmx:106794875 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1272 2 15765595 15766248 Gso10g0182 10 1901491 1902006 GST
Gso19g1741 19 46284663 46285367 Gso10g0182 10 1901491 1902006 PCT
Gso3g1775 3 43528172 43528876 Gso10g0182 10 1901491 1902006 PCT
Gso10g0182 10 1901491 1902006 Gso19g1742 19 46292709 46293503 PCT
Gso10g0182 10 1901491 1902006 Gso3g1776 3 43534486 43535545 PCT