Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1019 ATGAGATATGAAACACTAATCAATTTGGTCATTGGAGGGGTCAAGGATGAGAAATTCAAAGGGTTGATAAATGATGGCATAAAGGGTGATCACAAACTCAGATTTCTTATGCTTGCTCGTAGGAGATCATCATTTTTGAAGCTTTGGACACTTCGAGTTGCATTTGTTATGCTGCTTTGGACCATTGTAGTGCAATTCAAAGGCCTTGGTGACATGGTAACACCATCCATGTTCAAGACTCGTTCTTCTGCCTCCTCTCTACCACCTCAAAGGATTTACGAGAATAATAATGGGTATCTAATAGTTTCTTCCAATGGAGGATTGAATCAAATGCGAGCTGGAATATGTGACATGGTTACCATTGCAAGATATTTAAATGTTACACTAATAGTTCCTGAGCTGGATAATACCTCCTTTTGGAATGATCACAGCCAATTCAAAGATATATTCGATGTGGATTATTTCATCAATTCAATGAGAGATGAGGTTCGGATCCTGAAAGAGTTTCCTCCCCAACAAAAGAAGGTGGAAACAGAGTCCATCTATTCCATGCCACCCATTAGTTGGTCAAATATGACATATTACTATGATGTGATTCTTCCCCGGATAAAATCATATGGGATAGTACACTTCACTAAATCGGATGCAAGACTTGCAAATAATGGAATTCCTGAGGAAGTTCAGAGACTTAGATGCCGAGTGAACTACCATGCTTTGAGATTTGTTCCTCCAATTGAACAATTGGCCAAGAAGATTGTTAAGATTCTTAAGGAGAGAGGGCCTTTCTTGTCACTTCATCTGAGATATGAAATGGACATGATAGCTTTCACTGGTTGCAATGAAGGATGCAACAAGGAAGAGATTGATCAGTTAACAAAAATGAGATATGCTTATCCATGGTGGAAAGAGAAAGAGATAGATTCTGAGAAGAAAAGAAAAGATGGTAGTTGCCCTCTGACTCCTGAGGAAACTGCTCTAACACTACGTGCATTGGACATTGATCGTAATATTCAAGTTTATATTGCTGCTGGGGACATATACAAACCAGAGAAAAGAATGGCAAGTCTCAGAGAAGCCTTCCCAAATCTGGTTAAGAAGGAGACATTATTGGAACCCTCAGAGCTTGATCCTTTCCGGAATCATTCAAACCAAATGGCAGCATTGGATTATTACGTGTCAATAGAAAGTGATATCTTTGTTCCCTCATACAAAGGGAACATGGCAAAACTGGTTGAGGGCCACAGAAGGTACTTGGGATTCAAGAAGACAATTCTTTTAAACAGAAAAATTCTGGTGAAACTCATAGACCAGTACAAAAATGGGACCATAAATTGGAACCAGTTCTCCACTTCAGTGAAGGTAGCTCATTCAGACCGTGTAGGGAACCCAAGTACAAGATCAGTGGTGCCTGGAAAACCCAAGGAAGAGGATTATTTCTACTCAAACCCACAAGAGTGCTTGTCACCAGTTGATGGACCTTAA 1482 0.3981 MRYETLINLVIGGVKDEKFKGLINDGIKGDHKLRFLMLARRRSSFLKLWTLRVAFVMLLWTIVVQFKGLGDMVTPSMFKTRSSASSLPPQRIYENNNGYLIVSSNGGLNQMRAGICDMVTIARYLNVTLIVPELDNTSFWNDHSQFKDIFDVDYFINSMRDEVRILKEFPPQQKKVETESIYSMPPISWSNMTYYYDVILPRIKSYGIVHFTKSDARLANNGIPEEVQRLRCRVNYHALRFVPPIEQLAKKIVKILKERGPFLSLHLRYEMDMIAFTGCNEGCNKEEIDQLTKMRYAYPWWKEKEIDSEKKRKDGSCPLTPEETALTLRALDIDRNIQVYIAAGDIYKPEKRMASLREAFPNLVKKETLLEPSELDPFRNHSNQMAALDYYVSIESDIFVPSYKGNMAKLVEGHRRYLGFKKTILLNRKILVKLIDQYKNGTINWNQFSTSVKVAHSDRVGNPSTRSVVPGKPKEEDYFYSNPQECLSPVDGP* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1019 493 Pfam GDP-fucose protein O-fucosyltransferase 99 418 IPR019378 -
Gso2g1019 493 MobiDBLite consensus disorder prediction 459 493 - -
Gso2g1019 493 PIRSF UCP009360 15 86 IPR024709 -
Gso2g1019 493 PIRSF UCP009360 71 484 IPR024709 -
Gso2g1019 493 PANTHER OS02G0726500 PROTEIN-RELATED 8 492 - -
Gso2g1019 493 Gene3D - 233 428 - -
Gso2g1019 493 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 8 492 - -
Gso2g1019 493 CDD O-FucT_plant 99 423 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1019 Gso-Chr2 12081538 12090159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1019 91 493 Miscellaneous Gene Families AT2G37980 46.552 1.98e-128 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1019 K23280 - gmx:100818153 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1019 2 12081538 12090159 Gso2g1019 2 12081538 12090159 ECH
Gso1g0560 1 10655834 10661113 Gso2g1019 2 12081538 12090159 GST