Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0560 ATGCTCTACAACAAGGTTGTTATTGAGGAATCAGAGCTAGAGAAAAGGAGAAAGGAAAAATCATATAGTAAGATGAGATATGAAGCACTGATCAATTTGGTCATTGGAGGGGTCAAGAATGAGAAATTCAAAGGGTTGCTAAATGATGGCATAAAGGGTGAACACAAACTCAGATTTATCACGCTTGCTCGGAAGAGATCATCTCTTTTGAAGCTTTGGACACTTCGAGCTGCATTTGTGATGCTGCTTTGGACCATTATTGTAGTGCAATTCAAAGGCCTTGGTGACATGGTAACACCTGCCATGTTCAAGACTAGTACTCATTCTTCTGCCTTCTCTCTACCACCTCAAAGGGTTTACGAGAATAATAATGGGTATCTAATGGTTTCTTCGAATGGAGGATTGAATCAAATGCGAGCTGGAATATGTGACATGGTTACCATTGCAAGTTACTTAAATGTTACACTAATAGTTCCCGAGCTGGATAATATCTCTTTTTGGAATGATCATAGCCAATTCAAAGATATATTCAATGTGGATTATTTCATCAATTCATTGAGAGATGAGATTCAGATACTGAAAGAGCTTCCTCCCCAACAAAAGAAGAAGGTGGAAACAAAATCCATCTATTCCATGCCACCCATTAGTTGGTCAAATATGTCATATTACTACGATGTGATTCTTCCCCGGATAAAAACATATGGGGTGGTACACTTCACTAAATCTGATGCAAGACTTGCAAATAATGGGATTCCTGAGGAGGCTCAGAAACTTAGATGCCGAGTGAATTACCATGCTTTGAGATTTGTTCCTCCAATTGAGCAATTGGCCAAGAAGATTGTTAAGATTCTTAAGGAAAGAGGGTCTTTCTTGTCACTTCATCTTAGATATGAAATGGACATGATAGCTTTCACTGGTTGCAATGAAGGATGCAACAAGGAAGAGATTGATCAGTTAACAAAAATGAGATATGCTTATCCATGGTGGAAAGAGAAAGAGATAGATTCTGAGAAGAAAAGAAAAGATGGTCTTTGCCCTCTGACTCCTGAGGAAACTGCTCTAACACTACGTGCATTGGACATTGATCGTAATATTCAAGTTTATATTGCTGCTGGGGACATATATAAACCAGAGAAAAGAATGGCAAGTCTCAAAGAAGCCTTCCCAAATCTGGTTAAGAAGGAGACATTATTGGAACCCACGGAGCTTGATCCTTTCCGGAACCATTCAAACCAAATGGCAGCATTAGATTATTACGTGTCAATAGAGAGTGACATATTTGTTCCCTCATACATAGGGAACATGGCAAAACTGGTTGAGGGCCACAGAAGGTACTTGGGATTCAAGAAAACAATTCTTTTAAACAGAAAAATTCTGGTGAAACTCATAGACAAGTACAAAAATGGGATCATAAATTGGAACCAGTTCTCCACTTCAGTGAAGGTAGCTCATGCAGACCGTGTAGGGAACCCAATTACAAGATCAATGGTGCCTGGAAAACCCAAGGAAGAGGATTATTTCTACACAAACCCACAAGAGTGCTTGTCACCAGTTGATGGACCTTAA 1566 0.3934 MLYNKVVIEESELEKRRKEKSYSKMRYEALINLVIGGVKNEKFKGLLNDGIKGEHKLRFITLARKRSSLLKLWTLRAAFVMLLWTIIVVQFKGLGDMVTPAMFKTSTHSSAFSLPPQRVYENNNGYLMVSSNGGLNQMRAGICDMVTIASYLNVTLIVPELDNISFWNDHSQFKDIFNVDYFINSLRDEIQILKELPPQQKKKVETKSIYSMPPISWSNMSYYYDVILPRIKTYGVVHFTKSDARLANNGIPEEAQKLRCRVNYHALRFVPPIEQLAKKIVKILKERGSFLSLHLRYEMDMIAFTGCNEGCNKEEIDQLTKMRYAYPWWKEKEIDSEKKRKDGLCPLTPEETALTLRALDIDRNIQVYIAAGDIYKPEKRMASLKEAFPNLVKKETLLEPTELDPFRNHSNQMAALDYYVSIESDIFVPSYIGNMAKLVEGHRRYLGFKKTILLNRKILVKLIDKYKNGIINWNQFSTSVKVAHADRVGNPITRSMVPGKPKEEDYFYTNPQECLSPVDGP* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0560 521 PIRSF UCP009360 47 111 IPR024709 -
Gso1g0560 521 PIRSF UCP009360 94 512 IPR024709 -
Gso1g0560 521 PANTHER OS02G0726500 PROTEIN-RELATED 26 520 - -
Gso1g0560 521 CDD O-FucT_plant 126 451 IPR024709 -
Gso1g0560 521 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 26 520 - -
Gso1g0560 521 Pfam GDP-fucose protein O-fucosyltransferase 126 446 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0560 Gso-Chr1 10655834 10661113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0560 117 515 Miscellaneous Gene Families AT2G37980 46.517 6.53e-124 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0560 K23280 - gmx:100818153 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0560 1 10655834 10661113 Gso2g1019 2 12081538 12090159 GST