Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0396 ATGTTCTTTCGACCAAATGCCACGTGTCACTTTCTCGTTTGTCAGTTTTCTTTCCGTTTCTCTTTTGAAACTCCAAATCCACACAACGGTAACGGCCTTGGAAGTTGGAAACTCCATTCATCAATGGCGTCTGAAAACCCCAACCAGAGAAACTCCCTGTACCCGCAGGTTATCGAATCAGAGCCCGAAGCATGTTCTTCGAACCATTCCTCCTCTCTCTATCCCAAAATCGACGAGGTCGGCGACCTCGTCGAAAACCTCTTCCCGGACAACACCAGCCCCTCCGCGCCGCCGGTCGCCGCCGAAGAGGTCCTCATCAAGGTCCCCGGCGCCATCCTCCACCTCATCGACAAGGACTGCAGCGTCGAGCTCGCCTGCGGCAACCTCACCATCATCTGCCTTCGCCAGGGCCAGAGCCTTGTTGCCGTCTATGCGCGAGTCGGAGACGAGATCCAGTGGCCCCTGGCGAAGGACGAGGCCGCTGTCAAGGTCGATGACTCTCACTACTTCTTCTCTCTCCGTGTTCCGAAGGAGGAATCGGATTCCTCCTCAAGCGACGAGGAGGGAGAAAAAGCAAAACATCAGAATAAGAAAAAGAAGAAGAATAAGAAAAACAAAGATTCCAGTGCCAGCGTGCTGAGCTATGGCTTAACGATAGCGTCAAAGGGGCAGGAGGATTTGCTGAAGGAGCTGGACAAGGTGTTGCAGGAATGCAGTGCTTTCTCGGTGCAGAAGGTGTCGGAGAAGGCAAAGAAGGAGGGGGAGGCGTTGGATGCGTCGCTGGAGTTGACAATATCGCCGGCAGATTTGGAGACAGAGGAGAAAAAGGAGATGATGGAGGAGAAGTGTGCCGCGTATTGGACTACATTGGCTCCTAATGTGGAGGATTACAGTGGAACCGCTGCAAAACTTATTGCGGCTGGTTCTGGACAATTGGTTAAGGGGATTCTGTGGTGTGGGGATGTGACGGTAGAGCGGTTGCGGTGGGGGAATGAGGTCATGAAGAGGAGGATGGCTCCGGGTTCTCAGGGAGAGATTAGTCCTGAAACCTTGAAGCGGATCAAAAGGGTTAAGAAAGTGACCAAAATGACAGAGAGTGTGGCAAATGGGGTTCTCACTGGGGTTGTGAAGGTCTCTGGATTTTTCACTAGTTCAATGGCAAATTCAAAAGCCGGAAAGAAAATTTTCAGCCTTCTACCTGGAGAAGTTGTGCTTGCATCATTGGATGGATTCAGCAAAGTGTGTGATGCTGTTGAAGTAGCAGGAAAAAGTGTCATGTCAACATCTAACACTGTGACAACCGAGCTTGTCAATCACAGATACGGAGAAGAAGCTGCTAAGGCAACAAGTGAAGGACTGGATGCTGCTGGTCATGCTGTGGGTACTGCATGGGCCGCATTTAAGATTCGACAGGTTCTTAATCCTAAGAGTGTTATAAAACCTACCTCACTGGCCAAATCTGCAGCTAAAGCTGCTGCTGCAGAACTTAAGAATAAAAGGTCCAAGTGA 1509 0.5063 MFFRPNATCHFLVCQFSFRFSFETPNPHNGNGLGSWKLHSSMASENPNQRNSLYPQVIESEPEACSSNHSSSLYPKIDEVGDLVENLFPDNTSPSAPPVAAEEVLIKVPGAILHLIDKDCSVELACGNLTIICLRQGQSLVAVYARVGDEIQWPLAKDEAAVKVDDSHYFFSLRVPKEESDSSSSDEEGEKAKHQNKKKKKNKKNKDSSASVLSYGLTIASKGQEDLLKELDKVLQECSAFSVQKVSEKAKKEGEALDASLELTISPADLETEEKKEMMEEKCAAYWTTLAPNVEDYSGTAAKLIAAGSGQLVKGILWCGDVTVERLRWGNEVMKRRMAPGSQGEISPETLKRIKRVKKVTKMTESVANGVLTGVVKVSGFFTSSMANSKAGKKIFSLLPGEVVLASLDGFSKVCDAVEVAGKSVMSTSNTVTTELVNHRYGEEAAKATSEGLDAAGHAVGTAWAAFKIRQVLNPKSVIKPTSLAKSAAKAAAAELKNKRSK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0396 502 MobiDBLite consensus disorder prediction 179 207 - -
Gso2g0396 502 PANTHER SPARTIN 42 502 IPR045036 -
Gso2g0396 502 Pfam Senescence domain 304 490 IPR009686 -
Gso2g0396 502 MobiDBLite consensus disorder prediction 179 194 - -
Gso2g0396 502 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 42 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0396 Gso-Chr2 4220066 4224144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0396 K19366 - gmx:100777392 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0660 11 5926600 5931656 Gso2g0396 2 4220066 4224144 PCT
Gso2g0396 2 4220066 4224144 Gso11g0660 11 5926600 5931656 PCT