Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0660 ATGGCTTCTCAAAACCCTAATCAGAGAAATTCTCTGTATCCACAAGTAATCGATTCTAACCCCGATGCTCCCTCACCTCTCCTTATCACCAATCACTCGTCCTCTTCGCAACCCTGCCTCTACCCTTCCGTTGACTACAACGACCTCGTCGAGAACCTATTCTCTGAGGATGCCACCGCCGCCTGTTCCCCCTCTGCGCCGCCGGAGGCCACCGAGGAAGTCCTCTTCCGGATCCCCGGCGCGATCCTCAACCTCGTCGACAAGGACTACAGCGTCGAGCTCGCATGCGGCGACTTCTCCGTGATCCGTCTCCGGCAGGGCGACAACGCCGTCGCCGTGTACGCGCGCGTCGCCGACGAGATCCAATGGCCGCTCGCGAAGGACGCCGCCGCCGTGAAACTCGACGACTCGCACTACTTCTTCTCCTTCCGCGTCCCCAAGGGTTTCGATCCCGATGAAGAAGAGGATGTGCTCAGCTACGGCTTAACGATCGCGTCGAAGGGGCAGGAGAGATTAGTGAAAGATCTGGACGCGGTTTTGGAGAACTGCAGTTGCTTCTCCGTGCAGAGCGTTTCGGAGAATGCGAAGAAGAAAGGGGAGGCTCTGGATGGGACTGTGGCGAGGGAGGTTTCGCCGAAGGATATGGAGTCGGGGAAGAAGAAGGAGATGATGGAGGAGCGGTGCGCGGCGTATTGGACCACGTTGGCGCCCAATGTGGAGGATTACAGTGGAAAAACTGCGAAGATGATCGCTGCAGGCTCTGGACATGTTGTTAAGGGAATATTGTGGTGTGGGGATGTGACCGTGGACAGGTTGAAATGGGGGAATCAAGTTATGAAGAAGAGGATCGCTCCTGGTTCGCATGCTGAGGTTAGTCCTCAGACATTGAAGCGGATTAAAAGGGTTAAAAGAGTTACTAAAATGACAGAGAAAGTAGCTAATGGTTTCCTCTCAGGTGTCGTGAAAGTGTCTGGATTTTTCACCAGTTCAGTGATAAACTCAAAAGCTGGAAAGAAAATTTTCAGCTTTCTACCGGGGGAAGTTCTGCTTGCATCGTTGGATGGATTCAGTAAAGTGTGCGATGCTGTTGAAGTAACTGGAAAAAATGTCATGTCAACATCATCAACTGTGACAACTGAGCTTGTCGATCACAGATATGGAGAACAAGCAGCTGAAGCAACAAGTGAAGGGTTTAGTGCTGCTGGTCATGCTTTGGGTACTGCATGGGCTGCTTTTAAGATTAGGAAGGCTCTCAACCCTAAGAGTGTTCTTAAACCTACCTCCCTGGCCAAAGCTGGTGCTAAAGCTGCTGCTTCTGAATTTAAGTCTAAAAATTCCAAGTAA 1344 0.5171 MASQNPNQRNSLYPQVIDSNPDAPSPLLITNHSSSSQPCLYPSVDYNDLVENLFSEDATAACSPSAPPEATEEVLFRIPGAILNLVDKDYSVELACGDFSVIRLRQGDNAVAVYARVADEIQWPLAKDAAAVKLDDSHYFFSFRVPKGFDPDEEEDVLSYGLTIASKGQERLVKDLDAVLENCSCFSVQSVSENAKKKGEALDGTVAREVSPKDMESGKKKEMMEERCAAYWTTLAPNVEDYSGKTAKMIAAGSGHVVKGILWCGDVTVDRLKWGNQVMKKRIAPGSHAEVSPQTLKRIKRVKRVTKMTEKVANGFLSGVVKVSGFFTSSVINSKAGKKIFSFLPGEVLLASLDGFSKVCDAVEVTGKNVMSTSSTVTTELVDHRYGEQAAEATSEGFSAAGHALGTAWAAFKIRKALNPKSVLKPTSLAKAGAKAAASEFKSKNSK* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0660 447 PANTHER SPARTIN 1 148 IPR045036 -
Gso11g0660 447 PANTHER SPARTIN 153 447 IPR045036 -
Gso11g0660 447 Pfam Senescence domain 248 434 IPR009686 -
Gso11g0660 447 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 1 148 - -
Gso11g0660 447 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 153 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0660 Gso-Chr11 5926600 5931656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0660 K19366 - gmx:100805032 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0660 11 5926600 5931656 Gso11g0660 11 5926600 5931656 ECH
Gso11g0660 11 5926600 5931656 Gso2g0396 2 4220066 4224144 PCT
Gso2g0396 2 4220066 4224144 Gso11g0660 11 5926600 5931656 PCT