Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0357 ATGCACCATCAATGCGCCATGAGAAACAGCTTCAAGAAGACCATGTTCGGGGCTCGTTCTTCTCTGAGGGTTTTTATATCAAGTACCATCTACTCACATCATTCACGTAAAATTTGTAGCTTTTCGCAGGACCATGATCCGGGTTCGTGGGAATCAATGGAGGGTCTTCTTCGTTGCCCTGCGAATTTCGTTCCTCTGTCTCCCATCAGCTTCCTAGAGAGAGCAGCGAAGGTTTGCAGAGACAGAACCTCGCTTGTGTATGGTTCTTTGGAGTATAACTGGGGTGAGACCCATCAACGGTGCTTGAAACTCGCTTCTGCTATTACCCACTTGGGGATTTCACGTGGGGATGTGGTTGCCACCCTATCACCTAATGTCCCTGCCATGTATGAGCTACATTTTGCTGTCCCAATGGCTGGAGCCATTCTTTGCACCCTTAACTCACGCTTAGATGCGGCTATAGTTTCAGTCCTTCTTGAGCATTCACAAGCCAAGGTCCTTTTTGTAGACTATCAACTACTTGAAATTGCACGAGGAGCATTGGACCTGTTAGGCAAAAAAGCTAGAGAATTGCCAATTTTAGTTCTAATTGCCGACAATGATTGCACATCTCACATTGACATTACTTCAGTTAGTTATGAGTATGAAAGGCTACTGGCTGATGGGCATAATGGTTTTGACATAGTGAGACCCCATTGCGAATTGGATCCTATAAGTATAAATTACACCTCTGGTACCACATCTAGGCCTAAAGGAGTAGTCTTCAGTCACAGGGGTGCTTATCTTAACTCTCTAGCAACGGTTTTGCTCTTTAGAATGGATCTTTTTCCTGTTTATCTTTGGAATGTTCCAATGTTCCACTGCAACGGGTGGTGCCTCCCTTGGGGAGTGGCATCACAATTTGGGACCAATGTTTGTGTTAGGAAGGTCACTCCAAAGAACATTTTTGACAATATAGCTCAGCATAAGGTGACACACATGGCAGGAGCACCAACAGTGCTTAACATGATTGTGAACTCTGCATTGACTGATCGAAAGCCACTCAATCACAAGGTGGAGGTGATGACAGGAGGTTCGCCTCCGCCACCACAAATTCTTGCCAAGATGGAGGAGATTGGCTTTAACATCTCTCACCTTTATGGCCTCACAGAAACATATGGTCCAGGAACTTTCTGTGCATGGAGACCTGAGTGGGACTTGTTGCCCCATGAAGAGAGATCAAAGATGAAAGCAAGGCAAGGGGTGCCCCATGTGGCTTTGGAGGAAATTGATGTGAAAGATCCTTCCACAATGGAAAGTGTTCCATCTGATGGCAAAACAATGGGGGAGGTAATGTTTAGAGGGAATACAGTGATGAGTGGATATTTGAGAGATTTGAAAGCAACAAAAGAAGCTTTCAAAGATGGGTGGTTTCATAGTGGGGATCTAGCTGTGAAACATTCTGATGGTTACATAGAAATCAAGGACAGGTTGAAGGACATAGTAGTCTCCGGGGGAGAGAATATTAGCTCGGTTGAGGTAGAAACAGTTTTGTATAGCCATCCAGCGGTTCTTGAAGCTGCAGTTGTTGCAAAGCCTGATGATCATTGGGGCCAAACTCCTTGTGCTTTTGTGAAGTTGAAAGAGGGGTTTGATTTAGATGCTCTAGAAATAATCAACTTTTGCAGGGACCATTTGCCCCATTACATGGCTCCTAAAACTGTCATTTTTCAAGATATGCCAAAAACTTCAACAGGGAAGATACAGAAGTTTGTTCTAAGGGAGAAAGCCAAGGCTTTTAGAGGCAACCAAGCATAA 1797 0.4452 MHHQCAMRNSFKKTMFGARSSLRVFISSTIYSHHSRKICSFSQDHDPGSWESMEGLLRCPANFVPLSPISFLERAAKVCRDRTSLVYGSLEYNWGETHQRCLKLASAITHLGISRGDVVATLSPNVPAMYELHFAVPMAGAILCTLNSRLDAAIVSVLLEHSQAKVLFVDYQLLEIARGALDLLGKKARELPILVLIADNDCTSHIDITSVSYEYERLLADGHNGFDIVRPHCELDPISINYTSGTTSRPKGVVFSHRGAYLNSLATVLLFRMDLFPVYLWNVPMFHCNGWCLPWGVASQFGTNVCVRKVTPKNIFDNIAQHKVTHMAGAPTVLNMIVNSALTDRKPLNHKVEVMTGGSPPPPQILAKMEEIGFNISHLYGLTETYGPGTFCAWRPEWDLLPHEERSKMKARQGVPHVALEEIDVKDPSTMESVPSDGKTMGEVMFRGNTVMSGYLRDLKATKEAFKDGWFHSGDLAVKHSDGYIEIKDRLKDIVVSGGENISSVEVETVLYSHPAVLEAAVVAKPDDHWGQTPCAFVKLKEGFDLDALEIINFCRDHLPHYMAPKTVIFQDMPKTSTGKIQKFVLREKAKAFRGNQA* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0357 598 PANTHER ACYL-ACTIVATING ENZYME 32 593 - -
Gso2g0357 598 Pfam AMP-binding enzyme C-terminal domain 506 580 IPR025110 -
Gso2g0357 598 Gene3D - 492 594 IPR045851 -
Gso2g0357 598 ProSitePatterns Putative AMP-binding domain signature. 240 251 IPR020845 -
Gso2g0357 598 SUPERFAMILY Acetyl-CoA synthetase-like 50 591 - -
Gso2g0357 598 CDD ttLC_FACS_AEE21_like 63 588 - -
Gso2g0357 598 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 32 593 - -
Gso2g0357 598 Pfam AMP-binding enzyme 73 497 IPR000873 -
Gso2g0357 598 Gene3D - 59 491 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0357 Gso-Chr2 3900511 3904850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0357 129 593 Miscellaneous Gene Families AT1G20560 64.026 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0357 - - gmx:100500429 1226.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0712 11 6325643 6335816 Gso2g0357 2 3900511 3904850 PCT
Gso2g0357 2 3900511 3904850 Gso11g0712 11 6325643 6335816 PCT