Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0712 ATGAGTGAAGACTTGGTACCATTGTCACCGATCAGTTTCCTAGAAGGGGCAGCCACTAACTACGGTGATAAGATCTCCATCATCTACCATCATAATGTGAGATTTTCATGGAGACAAACCCATGAAAGATGCGTAAAGCTTGCTTCGGCTTTGGTTAACTTAGGGATTTCTCACAACGATATGGTTACAGCATTGGCACCAAATATTCCAGCACTGTACGAGCTTCATTTTGGTGTTCCTATGGCAGGGGGTGTTCTTTCTGCTCTCAATACCCAATTGGATGTAACAACATTGGCTCTACTTTTGGAACAACTAGAGCCATGCAAAATCATGTTTGTGGATTACCAATTAATTGATTCTGCTCTCAAAGCATGTGAAATTCTCTCCCACAGAAAATGCAAGCCACCCATCATTGTCCTAATACCAAATTATGACCAAGAACAATCTTTCTTAGCGAAGAATATCCCACCAGGTACCTTAAACTACAATGAACTAATTGCAATTGGAAAAAAAGATTTTGAGGCTTTAAAACCAAACAATGAATGCAATCCCATATCAGTGAACTACACATCAGGCTCCACGGGGATTCTTCCAAAAGGGGTTGTTTATAGTCATAGAAGTGCTTATCTCAATTCACTAGCAGCAATTGCTCGTTTTGAGATGAAACAATTGCCAGTGTTCCTATGGACAGTTGACATGTTTCGTTGCAATGGATGGTGCTTCCCTTGGGCAATGTCTGCTATTGGTGGCACCAACATTTGCCTAAGGAATGTCTCAGCAAAAGGCATATATGATGCAATTTATCTTTATAAGGTGACACAGTTTTGTGGTGCACCTACCCTTCTGGACATGATTGCAAATGCATCACCTAGTGACCAGAGGCCTCTGCCTCATAGGGTGAATGTCACAGTTGCTGGTGTGTTACCACCTTTTCATGTTCTTAACAAGGTGTCACAACTTGGATTTGATGTGAACATTGGATATGGCATGACAGAGACTTTAGGTCCTGTGATTGTAAGACCATGGAACCCCAATTCGGATGGCGAACACACAAAGCTGAATTATGGTGTTTCGGAGTTTAGGCAAGATGTTGATGTGAAGGATCCTGAAACTGGTGAAAGTACTCCTCATGATGGGAAAACCATAGGTGAAATCATGTTCAAAGGGAATGCTTTGATGCTGGGGTACCTTAAGAATTCACAAGCAAATGATAAGGCTTTTAGGGGTGGATGGTATAGGACTGGAGACCTTGCTGTTAGAGAACCAAATGGTTCTATAACTATGAAGGATAGAGCAAAGGATGTTATATATTCTAAGGGAGAGGTTGTGAGTTCACTAGAGGTGGAAGCAGTGTTGTTGAATCATCCAAAGGTTTTGAAAGCTGCTGTTGTTGGGAGATGTGATGAATGCTTGGTGGAATCTCTATGTGCAATTGTCAAATTGAAAGATGGATGTAGTGCCACTGTTGAAGAAATTATCAAGTTCTGTGAAGATCATTTGGCTACTCACATGATTCCTAGTACCGTGGTATTTGGAGATTTACCTGTTAATTCAACTGGGAAGGTTCAGAAATTTCGCATCAGGGAGAAGATCAAAGGCAGTGAGTGGTATGACTCAAAGAATTAG 1626 0.4127 MSEDLVPLSPISFLEGAATNYGDKISIIYHHNVRFSWRQTHERCVKLASALVNLGISHNDMVTALAPNIPALYELHFGVPMAGGVLSALNTQLDVTTLALLLEQLEPCKIMFVDYQLIDSALKACEILSHRKCKPPIIVLIPNYDQEQSFLAKNIPPGTLNYNELIAIGKKDFEALKPNNECNPISVNYTSGSTGILPKGVVYSHRSAYLNSLAAIARFEMKQLPVFLWTVDMFRCNGWCFPWAMSAIGGTNICLRNVSAKGIYDAIYLYKVTQFCGAPTLLDMIANASPSDQRPLPHRVNVTVAGVLPPFHVLNKVSQLGFDVNIGYGMTETLGPVIVRPWNPNSDGEHTKLNYGVSEFRQDVDVKDPETGESTPHDGKTIGEIMFKGNALMLGYLKNSQANDKAFRGGWYRTGDLAVREPNGSITMKDRAKDVIYSKGEVVSSLEVEAVLLNHPKVLKAAVVGRCDECLVESLCAIVKLKDGCSATVEEIIKFCEDHLATHMIPSTVVFGDLPVNSTGKVQKFRIREKIKGSEWYDSKN* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0712 541 Pfam AMP-binding enzyme 16 437 IPR000873 -
Gso11g0712 541 SUPERFAMILY Acetyl-CoA synthetase-like 8 533 - -
Gso11g0712 541 Pfam AMP-binding enzyme C-terminal domain 447 521 IPR025110 -
Gso11g0712 541 Gene3D - 3 432 IPR042099 -
Gso11g0712 541 Gene3D - 433 534 IPR045851 -
Gso11g0712 541 PANTHER ACYL-ACTIVATING ENZYME 17 533 - -
Gso11g0712 541 CDD ttLC_FACS_AEE21_like 6 529 - -
Gso11g0712 541 PANTHER FATTY ACYL-COA SYNTHETASE FAMILY PROTEIN 17 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0712 Gso-Chr11 6325643 6335816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0712 72 533 Miscellaneous Gene Families AT1G20560 50.746 1.54e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0712 - - gmx:100819291 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0712 11 6325643 6335816 Gso11g0712 11 6325643 6335816 ECH
Gso11g0712 11 6325643 6335816 Gso2g0357 2 3900511 3904850 PCT
Gso2g0357 2 3900511 3904850 Gso11g0712 11 6325643 6335816 PCT