Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0293 ATGTGCAGCATGAGTGTCGATGATGATGGCGAGGACACATCCGGGATTTCATCGTTCCCATTGGGAATTTTGAGTAACTCAGTGCATCAAGATTCACAAAGTTCTCACGTTACAGCTTTTAATTCAGGTCATGGATCCTCAAAGTTGGACAACGAGTCAACCTCGTCTAACACCATACGGGATGTTCATATTTCAATGCGGTTAATGGAGGACTTTCTTGATCTTGCTAAAGAAAATACAGGAAAGGATTTGGAAACTTGTGGTATACGTGGTGCCTATCTTGAGAAGGGAACCCTCTACATGACTACCCTGATCATACCAAAGCAGGAATCAGCTTCCTATTCTTGTCAAGCTACAAATGAGGAGGAAGTTTTCAAAATTCTAAATGAAAGATCCCTTTATCCTGAGGGATGGATCCATACACATCCTTCTCAAAGTTGTTTCATGTCATCTGTGGATCTGCACACTCAATATTCATATCAGATGATGATTCCTGAGGCATTTGCCATTGTCTTGGCGCCAAATGATACCTCAAGGTCTACCTACTGTCTCTTGTTCTACAATATGGACGATTTCTCACCAATTCTTCTAGTTATTGTTGTGCTTAAAAACTAA 615 0.4081 MCSMSVDDDGEDTSGISSFPLGILSNSVHQDSQSSHVTAFNSGHGSSKLDNESTSSNTIRDVHISMRLMEDFLDLAKENTGKDLETCGIRGAYLEKGTLYMTTLIIPKQESASYSCQATNEEEVFKILNERSLYPEGWIHTHPSQSCFMSSVDLHTQYSYQMMIPEAFAIVLAPNDTSRSTYCLLFYNMDDFSPILLVIVVLKN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0293 204 Gene3D Cytidine Deaminase, domain 2 40 193 - -
Gso2g0293 204 ProSiteProfiles MPN domain profile. 62 191 IPR037518 -
Gso2g0293 204 MobiDBLite consensus disorder prediction 34 56 - -
Gso2g0293 204 SUPERFAMILY JAB1/MPN domain 62 176 - -
Gso2g0293 204 PANTHER AMSH-LIKE PROTEASE 32 181 - -
Gso2g0293 204 PANTHER FI19924P1 32 181 - -
Gso2g0293 204 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 59 166 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0293 Gso-Chr2 3177153 3179467 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0293 K11866 - gmx:102667454 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0293 2 3177153 3179467 Gso2g0293 2 3177153 3179467 ECH
Gso1g0271 1 3201914 3206565 Gso2g0293 2 3177153 3179467 GST