Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0271 ATGTACAAAAGGTCTAATGAAGAAAAGGATGTAAGTAGTAAGAAGGTTAGAAATTGTGATACAGCAGAAAGCAATATTCAAAGCGCGATTGTCGATGGCGAGGACACATCTGAGATTCCATCATTCCCATTAGGAAATTTGAGTACTAGTTGGTGCTCACTGGTTTGTAAACCGGCTGCTATTAAGACAGCCAACAGATACTTCTTGCTTCAAAAAGTAACTCAGTCCTGGCCTTCCCCTGCCTTGTGTTTTGTGGAGACAGTGCCTCAAGATGCACAAAGTTCTCATGTTACAGCTTTTAATTCAGGTGATGGATCCTCAAAGTCGGACAACGAACGGGATGTTCATATTTCAATGCGGTTAATGGAGGACTTTCTTGATCTTGCTAAAGAAAATACAGAAAAGGATTTGGAAACTTGTGGTATACTTGGTGCCTATCTTGAGAAGGGAACCCTCTATTTGACTACCCTGATCATACCAAAGCAGGAATCAGCTTCCAATTCTACACATCCTTCTCAAAGTTGTTTCATGTCATCGGTGGATCTGCACACTCAATATTCCTACCAGGTGATGATTCCTGAGGCATTTGCCATTGTCTTGGCACCAAATGATACCTCAAGGAGCTGTGGATTATTTCGTCTGACCAAACCTGAAGGAATGAATATTCTAAAAAATTGCCAGGAGACAGGATTTCACCCACACAAAGAACCAGACAATGGCAGCCCCGTATATGAGCACTGCTCCAATGTGTACAAAAACTCCAATCTAAGGTTTGAAATCTTTGATTTACGCCAAAAATGA 801 0.4132 MYKRSNEEKDVSSKKVRNCDTAESNIQSAIVDGEDTSEIPSFPLGNLSTSWCSLVCKPAAIKTANRYFLLQKVTQSWPSPALCFVETVPQDAQSSHVTAFNSGDGSSKSDNERDVHISMRLMEDFLDLAKENTEKDLETCGILGAYLEKGTLYLTTLIIPKQESASNSTHPSQSCFMSSVDLHTQYSYQVMIPEAFAIVLAPNDTSRSCGLFRLTKPEGMNILKNCQETGFHPHKEPDNGSPVYEHCSNVYKNSNLRFEIFDLRQK* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0271 266 PANTHER AMSH-LIKE PROTEASE 25 168 - -
Gso1g0271 266 PANTHER AMSH-LIKE PROTEASE 169 265 - -
Gso1g0271 266 Gene3D Cytidine Deaminase, domain 2 92 168 - -
Gso1g0271 266 Gene3D Cytidine Deaminase, domain 2 169 266 - -
Gso1g0271 266 PANTHER FI19924P1 25 168 - -
Gso1g0271 266 PANTHER FI19924P1 169 265 - -
Gso1g0271 266 CDD MPN_AMSH_like 113 264 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Gso1g0271 266 SUPERFAMILY JAB1/MPN domain 115 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0271 Gso-Chr1 3201914 3206565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0271 K11866 - gmx:100807282 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0271 1 3201914 3206565 Gso2g0293 2 3177153 3179467 GST