Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0065 ATGGCATTCTTATTCTTCCCCTCTAAGGGTATCTTTCTCTCTAGCTTTTTGTTATGCTTTGCTATTCTGTCTTTGGGAGCTGAAGCTCGTAGATCACCATCACCCATCTCTTCTCTCATTAGCAAAGAGCTTTTTGATTCCATTTTCATCCACAAAGATAACAATGCATGCCCTGCCAGAAACTTCTACACCTACGACTCCTTCATCAATGCATCCAAACGCTTCCCAAGATTTGGCACCACTGGTAGTCCAGCCACACGCAAGCGTGAGATTGCTGCCTTTCTTGCTCAGATTTCACATGAAACCACAGGTGGGTGGGCTACTGCACCTGATGGACCCTATGCTTGGGGATTGTGCTTCAAGGAAGAAATTAGTCCTCAAAGTAACTATTGTGATTCCACCAACACACAATGGCCTTGTTATCCAGGACAAAGTTACAAAGGCAGAGGACCAATTCAACTCTCATGGAACTACAACTATGGGCCAGCAGGGAAGGCTTTGGGATTTGATGGGTTGAGAAACCCGGATGTGGTGTCAAACAATTCATTGATTGCCTTTCAAACAGGTCTCTGGTTTTGGATGACAGAGCAAAAGCCCAAACCTTCTTGCCACAATGTAATGGTTGGAAAATATGTGCCAACACAAGCTGACATAGCAGCTAATCGAACTAAAGGGTATGGCCTAGTGACTAACATAATCAATGGTGGACTTGAATGTGGAATTCCTGATGATTCAAGGGTGAATGATCGGATTGAATACTTTAAGAGATATGCAACCTTGTTTAAAGTAGATACAGGACCTAACTTGGATTGTGCATATCAGAAGTCTTTCCAAACTGTAGCTTAG 846 0.4326 MAFLFFPSKGIFLSSFLLCFAILSLGAEARRSPSPISSLISKELFDSIFIHKDNNACPARNFYTYDSFINASKRFPRFGTTGSPATRKREIAAFLAQISHETTGGWATAPDGPYAWGLCFKEEISPQSNYCDSTNTQWPCYPGQSYKGRGPIQLSWNYNYGPAGKALGFDGLRNPDVVSNNSLIAFQTGLWFWMTEQKPKPSCHNVMVGKYVPTQADIAANRTKGYGLVTNIINGGLECGIPDDSRVNDRIEYFKRYATLFKVDTGPNLDCAYQKSFQTVA* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0065 281 CDD chitinase_GH19 42 271 - -
Gso2g0065 281 ProSitePatterns Chitinases family 19 signature 1. 57 79 IPR000726 GO:0004568|GO:0006032|GO:0016998
Gso2g0065 281 SUPERFAMILY Lysozyme-like 36 278 IPR023346 -
Gso2g0065 281 PANTHER CHITINASE 10 14 277 - -
Gso2g0065 281 Gene3D Endochitinase, domain 2 122 180 - -
Gso2g0065 281 Pfam Chitinase class I 39 271 IPR000726 GO:0004568|GO:0006032|GO:0016998
Gso2g0065 281 Gene3D - 43 277 - -
Gso2g0065 281 PANTHER CHITINASE-RELATED 14 277 - -
Gso2g0065 281 ProSitePatterns Chitinases family 19 signature 2. 184 194 IPR000726 GO:0004568|GO:0006032|GO:0016998
Gso2g0065 281 PIRSF Endochitinase 14 278 IPR016283 GO:0004568|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0065 Gso-Chr2 760154 761758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0065 14 277 Glycoside Hydrolase AT1G02360 71.053 3.02e-149 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0065 - - gmx:100785397 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1868 19 47376411 47378133 Gso2g0065 2 760154 761758 PCT
Gso2g0065 2 760154 761758 Gso19g1868 19 47376411 47378133 PCT