Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1349 ATGCGGTGGCCGGCGCCGCCGGCGAACGCCGGGCTGGGCATAGCCGCCATGTCCTATATCACCGTCGACTACCTCCGCCACCTTTCCCCGGCGTGGCACTCGCGTCTGCAACCGGCGCTGTGGTCCCTCCTCGCCCTCACCGCCGTTTTCCGCGTCCCCTCCTACCGGCACTGGTCTGCCGAGTTCCGGTCGGCGATTCCGTTCATCGCCTCCATGCTCTTCATGCTCGCCGCCCTCCTCTGCGAAATGATCTCCGTCCGCTCCGTCACCGCCGTCCTCGGCCTCGACTGGCACCTGAACACACCTCCTCTTCCAGATACGGGGCAATGGTTGCTCTTGGCGTTAAATGAGAAACTTCCTACTCCAATTGTTGAGATACTAAGAGCTCGAATCATTGGACTGCACCATTTCTTGATGTTGTTTATGATGCTGGCTTTCTCTGTGCTATTTGATTCTGTTAAAGCTCCGGGCCTCGGATTAGGTGCTAGGTACATGTTTACCATGGCAGTTGGCCGCCTTCTTCGTGCCATAACTTTTGCATCTACAATTCTGCCATCTGCCCGTCCTTGGTGTGCTGGTTCCCGGTTCAGAGTTCCGGGATATCCTCATCGTTGGGCTCAGAAATATTATGTTCCCTATGCTACAGATCATGATGCTATCAGCCGGGTGATAAAGCTCGATACAGCTTACGTTGACATTGGAAAACCAGTTGGTGACTACCAGCCAGATTGGGGTTCGATGAGCTTTCTAATTGATTTTCTGCGACCCACTGTCTCCGAAGGACCTTCATGGTACAGTCTGTTAAAGAAAGCTGGAGGTGGCTGCAATGACCTCCTATACAGTGGCCACATGCTTGTTGCCGTGCTCACAGCCATGGCTTGGACGGAAGCATATGGAGGATTCAGTTCTGCTCTTGTATGGCTTCTTGTGATGCACAGTGCCCAAAGAGAAATACGAGAACGCCATCATTACACTGTAGACTGCGTTGTAGCCATCTATGTGGGGATCCTCTTATGGAAGATGACAGGTTTTATCTGGTCACATGAAGCTACATCTAGTAATAGGAGGCTGACTAAATTTGAGAAGATTCAAAGCAGACTAATCCAAGCTTCCAAAGACTCGGACATTGATGAAGTGAGGGAGCTTCTCAAAGAGATTGAGTTAAGCAATGAAGAGAGCAAGAATCAGACTGGAATTAAATATTCACGGTTGTTTCGTAGTGCCACCATTGTCTTTGCACTTGTCATTGTTGTTCTGGCTTTCACACTGACAAGTGATGGATGA 1284 0.5078 MRWPAPPANAGLGIAAMSYITVDYLRHLSPAWHSRLQPALWSLLALTAVFRVPSYRHWSAEFRSAIPFIASMLFMLAALLCEMISVRSVTAVLGLDWHLNTPPLPDTGQWLLLALNEKLPTPIVEILRARIIGLHHFLMLFMMLAFSVLFDSVKAPGLGLGARYMFTMAVGRLLRAITFASTILPSARPWCAGSRFRVPGYPHRWAQKYYVPYATDHDAISRVIKLDTAYVDIGKPVGDYQPDWGSMSFLIDFLRPTVSEGPSWYSLLKKAGGGCNDLLYSGHMLVAVLTAMAWTEAYGGFSSALVWLLVMHSAQREIRERHHYTVDCVVAIYVGILLWKMTGFIWSHEATSSNRRLTKFEKIQSRLIQASKDSDIDEVRELLKEIELSNEESKNQTGIKYSRLFRSATIVFALVIVVLAFTLTSDG* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1349 427 PANTHER OSJNBA0035I04.2 PROTEIN 4 427 - -
Gso20g1349 427 Coils Coil 376 396 - -
Gso20g1349 427 Pfam PAP2 superfamily C-terminal 274 341 IPR025749 -
Gso20g1349 427 PANTHER SPHINGOMYELIN SYNTHETASE 4 427 IPR045221 GO:0016780
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1349 Gso-Chr20 43624943 43627943 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1349 - - gmx:100818599 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1349 20 43624943 43627943 Gso10g2006 10 47035149 47038103 GST