Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2006 ATGCCGGCGCCGCCGGCAAACGCCGGCCTGGGCGTCGCCGCCATGTCCTACATCGCCGTCGACTACCTCCGCCACCTTTCTCCGGTGTGGCACTCGCGTCTGCAACCGGCACTGTGGTCCCTCCTCGCCCTCGCTGCCGTGGTCCGCGTCCCCTCCTACCGGCACTGGTCCGCGGAGTTCCGGTCGGCGATTCCGTTCATCGCCTCCATGTTCTTTATGCTCGCCGCCCTCCTCTACGAAATGATCTCCGTCCGCTCCGTCACCGCTGTGCTCGGCCTCGACTGGCACCTGAATACACCTCCTCTTCCAGATACGGGGCAATGGTTGCTCTTGGCGTTAAATGAGAAACTTCCTTCTCCAATTGTTGAGATATTAAGAGCTCGAATCATTGGACTGCACCATTACTTGATGCTGTTTATGATGCTGGCTTTCTCTGTGCTATTTGATTCTGTGAAAGCTCCAGGCCTCGGATTAGGTGCTAGGTACATGTTTACCATGGCAGTTGGTCGCCTTCTTCGTGCCATAACTTTTGCATCTACAATTCTGCCATCAGCTCGCCCTTGGTGTGCTGGTTCTCGGTTCAGAGTTCCGGGATATCCTCATCGTTGGGCTCAGAAATATTATGTTCCCTATGCTACAGATCATGATGCTATCAGCCGGGTGATAAAGGTCGATACAGCTTATGTTGACATTGGAAAACCAGTTGGTGACTACCAGCCAAATTGGGGTTCGATGAGCTTTCTAATTGATTTTATGCGACCCACTGTCTCCGAAGGACCTTCATGGTACAGTCTGTTAAAGAAAGCTGGAGGTGGCTGCAATGACCTCCTATACAGTGGCCACATGCTTGTAGCCGTACTCACAGCCATGGCTTGGACGGAAGCATATGGAGGATTCAGTTCTGCTCTTGTATGGCTTCTTGTGATGCACAGTGCCCAAAGAGAAATACGAGAACGCCATCATTACACTGTAGACTGCATTGTGGCCATCTATGTGGGGATTCTCTTATGGAAGATGACAGGTTTTATCTGGTCACGTGAAGCTACATCTAGTAATAGGAGGCTGAATAAGTTTGAGAAGATTCAAAGCAGACTAATCCAAGCTTCAAAAGACTCGGACATTGATGAAGTGAGGGAGCTTCTCAAAGAGTTTGAGTTAAGCAGTGAAGAGAGCAAGAATCAGATTGGAATTAAATATGCACGGTTGTTTCGAAGTGCCACCATTGTCTTTGCCCTCACCATTGTTGTTCTGGCTTTCACATTGACAAGTGATGGATGA 1278 0.5008 MPAPPANAGLGVAAMSYIAVDYLRHLSPVWHSRLQPALWSLLALAAVVRVPSYRHWSAEFRSAIPFIASMFFMLAALLYEMISVRSVTAVLGLDWHLNTPPLPDTGQWLLLALNEKLPSPIVEILRARIIGLHHYLMLFMMLAFSVLFDSVKAPGLGLGARYMFTMAVGRLLRAITFASTILPSARPWCAGSRFRVPGYPHRWAQKYYVPYATDHDAISRVIKVDTAYVDIGKPVGDYQPNWGSMSFLIDFMRPTVSEGPSWYSLLKKAGGGCNDLLYSGHMLVAVLTAMAWTEAYGGFSSALVWLLVMHSAQREIRERHHYTVDCIVAIYVGILLWKMTGFIWSREATSSNRRLNKFEKIQSRLIQASKDSDIDEVRELLKEFELSSEESKNQIGIKYARLFRSATIVFALTIVVLAFTLTSDG* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2006 425 PANTHER OSJNBA0035I04.2 PROTEIN 3 425 - -
Gso10g2006 425 Coils Coil 374 394 - -
Gso10g2006 425 Pfam PAP2 superfamily C-terminal 272 339 IPR025749 -
Gso10g2006 425 PANTHER SPHINGOMYELIN SYNTHETASE 3 425 IPR045221 GO:0016780
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2006 Gso-Chr10 47035149 47038103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2006 - - gmx:100809466 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2006 10 47035149 47038103 Gso10g2006 10 47035149 47038103 ECH
Gso20g1349 20 43624943 43627943 Gso10g2006 10 47035149 47038103 GST