Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1345 ATGAATAAGTGCTTTACTTGTCACAGTTTTGTTCTTGGAGCCACAAAACTATACTCGGATACTCTAAAAATTGCTCGCCGTCATGTCTACTCAAATAAAAACAAAAAATTGAAACCTTTGGCAAGGTTCCATTGTTTTCAGGAAAAATTAAGGATCATGGAGGTTGAGTTGGGGCTAAAGATCACAAGAACCAGATATGATAGCACTTCCGTTTCTGATTTTCAGTTTGCCAAAGACAGATCAGGACCTGTCTTCTTGTCTAAAGAAACCGATGCAAAGCTCATCCTCACTGCACATCTTAAAGGATATAAGAAGGAGGATATTGGCATCAATATCAATAAAGATGGTAGTGAGATTTCGGTGAGTGGGGAGAAGGAGGTGCAGGAAATGCAAATGATACCGTTCAAGAAAGAGCTGAAAACCATAGGGTTTGAGAAGAAGTTTGGTATTCCTGATGGGGTGGTTTTGGATTGGATCAAAGCTAAGTATAACGAAGGGGATGAAGTTTTGACAATTGTGATGCCAAAAACAGAAGTGGGGAAAGGAAATAGAGAAATTGAGGAGGTGAATGAAGAAGTAGCAGAGCCAAGTGTACTAGAAAATGTTGTTGATAGTGTGACACCAGAGCCAGAGGAAAGTGTGCCAGATAAGAGTGAAGAGGAAACACCTCCAGTGAAGAAGCCAGAAAAACCATGGACACCTTGTCCTCCTTTGGTTTTTGGAGGATCAACTTTGCTTGTAACTCTAATATTTCTTGTAATAAACTATATTAGAGCCAGAAAGAGTTAA 789 0.3954 MNKCFTCHSFVLGATKLYSDTLKIARRHVYSNKNKKLKPLARFHCFQEKLRIMEVELGLKITRTRYDSTSVSDFQFAKDRSGPVFLSKETDAKLILTAHLKGYKKEDIGININKDGSEISVSGEKEVQEMQMIPFKKELKTIGFEKKFGIPDGVVLDWIKAKYNEGDEVLTIVMPKTEVGKGNREIEEVNEEVAEPSVLENVVDSVTPEPEESVPDKSEEETPPVKKPEKPWTPCPPLVFGGSTLLVTLIFLVINYIRARKS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1345 262 PANTHER HEAT SHOCK PROTEIN 26 53 228 IPR045045 -
Gso20g1345 262 PANTHER HEAT SHOCK PROTEIN 26 227 261 IPR045045 -
Gso20g1345 262 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 75 192 IPR002068 -
Gso20g1345 262 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 53 228 - -
Gso20g1345 262 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 227 261 - -
Gso20g1345 262 CDD ACD_sHsps-like 88 176 - -
Gso20g1345 262 Pfam Hsp20/alpha crystallin family 88 186 IPR002068 -
Gso20g1345 262 SUPERFAMILY HSP20-like chaperones 87 182 IPR008978 -
Gso20g1345 262 MobiDBLite consensus disorder prediction 204 231 - -
Gso20g1345 262 Gene3D - 45 187 IPR008978 -
Gso20g1345 262 MobiDBLite consensus disorder prediction 210 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1345 Gso-Chr20 43596192 43597549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1345 - - gmx:100799556 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1345 20 43596192 43597549 Gso10g2010 10 47053975 47055084 GST
Gso16g1336 16 32813550 32820337 Gso20g1345 20 43596192 43597549 PCT
Gso2g0668 2 6925159 6934648 Gso20g1345 20 43596192 43597549 PCT
Gso20g1345 20 43596192 43597549 Gso16g1336 16 32813550 32820337 PCT
Gso20g1345 20 43596192 43597549 Gso2g0668 2 6925159 6934648 PCT