Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2010 ATGGAGGTTGAGTTGGGGCTGAAAATCACAACGACCAGAGATGATACCACTTCCGTTTCCGATTTTCAATTTGCCAAAGACAGATCAGGACCTGTCTTCTTGTCTAAAGAAACTGATGCAAAGCTCATCCTCACTGCACATCTTAAAGGATATAAGAAGGAGAACATTGACATCAATATCAATAAAGATGGTAGTGAGATTTCGGTGAGTGGAGAGAAGGAGGTGCAGGAAATGCAAATGATACCGTTCAAGAAAGTGCTAAAAACCATAGGGTTTGAGAAGAAGTTTAGTATTCCTGATGGGGTGGTTTTGGATCAGATCAAGGCTAAGTATAACGAAGGGGATGAAGTTTTGACAATTGTGATGCCAAAAACGGAAGTGGGAAAAGGAAGTAGAGAAATTGAGGAGGTGAAAGAAGAAGTACCCGAGTCAAGTGTACAAGAAAATGTTGTTGATAGCGTGACACCAGAGCCACAGGAAAGTGTGCCAGAAAAGATTGAAGAGGAAACACCTGCAGTGAAGAAGCCCCAAAAACCATGGACACCTTGTCCTCCTTTGGTTTTTGGAGGATCAACTTTGCTTGTAACTCTAATATTTCTTGTAATAAACTATATTAGAGCGAGAAAGAGATAA 633 0.4076 MEVELGLKITTTRDDTTSVSDFQFAKDRSGPVFLSKETDAKLILTAHLKGYKKENIDININKDGSEISVSGEKEVQEMQMIPFKKVLKTIGFEKKFSIPDGVVLDQIKAKYNEGDEVLTIVMPKTEVGKGSREIEEVKEEVPESSVQENVVDSVTPEPQESVPEKIEEETPAVKKPQKPWTPCPPLVFGGSTLLVTLIFLVINYIRARKR* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2010 210 SUPERFAMILY HSP20-like chaperones 35 129 IPR008978 -
Gso10g2010 210 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 174 210 - -
Gso10g2010 210 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 1 178 - -
Gso10g2010 210 MobiDBLite consensus disorder prediction 145 178 - -
Gso10g2010 210 Pfam Hsp20/alpha crystallin family 36 134 IPR002068 -
Gso10g2010 210 Gene3D - 12 153 IPR008978 -
Gso10g2010 210 PANTHER HEAT SHOCK PROTEIN 26 174 210 IPR045045 -
Gso10g2010 210 PANTHER HEAT SHOCK PROTEIN 26 1 178 IPR045045 -
Gso10g2010 210 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 140 IPR002068 -
Gso10g2010 210 CDD ACD_sHsps-like 36 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2010 Gso-Chr10 47053975 47055084 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2010 - - gmx:100779509 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2010 10 47053975 47055084 Gso10g2010 10 47053975 47055084 ECH
Gso20g1345 20 43596192 43597549 Gso10g2010 10 47053975 47055084 GST
Gso16g1336 16 32813550 32820337 Gso10g2010 10 47053975 47055084 PCT
Gso2g0668 2 6925159 6934648 Gso10g2010 10 47053975 47055084 PCT
Gso10g2010 10 47053975 47055084 Gso16g1336 16 32813550 32820337 PCT
Gso10g2010 10 47053975 47055084 Gso2g0668 2 6925159 6934648 PCT