Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1339 ATGGATCACAGTGCGGATGCTCAACGCACGGACCTGATGACCATCACCCGTTTCGTGCTGAACGAACAGTCGAAGCACCCAGAGTCTCGTGGCGATTTCTCAATCCTGCTCAGTCACATTGTTCTCGGCTGCAAGTTCGTCTGCTCTGCTGTTAACAAGGCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAGGGTGAAGAGCAAAAGAAATTGGATGTCCTATCCAATGATGTCTTCATCAAGGCATTGATCAGCAGTGGACGAACATGCATCTTGGTGTCTGAAGAAGATGAGGAAGCAACATTTGTGGAACCTTCTAAGCGTGGAAAATACTGTGTTGTTTTTGACCCGCTGGATGGTTCCTCTAACATTGATTGTGGTGTTTCAATTGGCACAATCTTTGGGATTTATTTGATAAAAGAAGACCATGAACCAACCGTAGAAGATGTTTTGCAACCTGGGAAGAACATGTTGGCAGCTGGTTATTGCATGTATGGAAGCTCTTGCACGCTTGTGTTAAGCACTGGAAGTGGTGTTAATGGTTTCACCCTTGATCCATCTCTTGGGGAGTTCATTCTAACTCACCCTGACATCAAGATCCCAAAGAAAGGCAAGATCTATTCAGTGAATGAAGGAAATGCTAAAAACTGGGATGGCCCTACTACCATGTATGTGGAAAACTGCAAGTATCCAAAAGATGGTTCATCACCAAAGTCCCTAAGATATATTGGAAGCATGGTTGCTGATGTTCACCGCACATTGCTTTATGGAGGTATCTTTCTGTACCCGGCTGATAAAAAGAGTCCAAATGGGAAACTTCGTGTACTCTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAAGCAGGAGGACAGGCTTTCACCGGCAACCAAAGGGCACTTGATTTGGTTCCAAAGAAGTTGCACGAGCGATCTCCCATATTCCTTGGTAGCTATGAAGATGTAGAGGAAATCAAGGCTCTTTACTCTGCTGATGAAAAATAG 1020 0.4451 MDHSADAQRTDLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNDVFIKALISSGRTCILVSEEDEEATFVEPSKRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYLIKEDHEPTVEDVLQPGKNMLAAGYCMYGSSCTLVLSTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTTMYVENCKYPKDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGNQRALDLVPKKLHERSPIFLGSYEDVEEIKALYSADEK* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1339 339 SUPERFAMILY Carbohydrate phosphatase 8 334 - -
Gso20g1339 339 Gene3D - 4 203 - -
Gso20g1339 339 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Gso20g1339 339 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Gso20g1339 339 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Gso20g1339 339 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Gso20g1339 339 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Gso20g1339 339 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Gso20g1339 339 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Gso20g1339 339 PIRSF FBPtase 9 339 IPR028343 GO:0042132
Gso20g1339 339 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC-LIKE 2 339 - -
Gso20g1339 339 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Gso20g1339 339 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Gso20g1339 339 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 2 339 IPR000146 GO:0005975|GO:0016791
Gso20g1339 339 PIRSF FBPtase_SBPase 9 339 IPR000146 GO:0005975|GO:0016791
Gso20g1339 339 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
Gso20g1339 339 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Gso20g1339 339 Gene3D - 204 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1339 Gso-Chr20 43485055 43489924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1339 K03841 - gmx:100815943 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1339 20 43485055 43489924 Gso10g2016 10 47151607 47155988 GST
Gso16g1348 16 32993515 32998674 Gso20g1339 20 43485055 43489924 PCT
Gso20g1339 20 43485055 43489924 Gso16g1348 16 32993515 32998674 PCT