Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1348 ATGGACCACAGCGCTGATGCACATCGCACGGACTTGATGACCATAACGCGGTTCGTGCTGAACGAGCAATCCAAGCACCCCGAGTCACGCGGCGATTTCACCATCTTGCTCAGTCACATTGTTCTCGGTTGCAAGTTCGTTTGTTCCGCTGTCAGCAAGGCTGGTCTTGCTAAACTTATTGGACTCGCTGGAGAAACCAATGTTCAGGGTGAAGAACAGAAGAAACTTGATGTTCTTTCCAATGAGGTTTTCATCAAGGCTCTCATAAGCAGTGGCCGAACATGCATCTTGGTTTCTGAAGAAGACGAAGAAGCGATAATTGTGGAGCCTTCTAAGCGCGGAAAGTACTGTGTTTGCTTTGACCCATTGGATGGCTCGTCCAACATTGATTGTGGGGTTTCCATTGGCACAATTTTTGGGGTTTATGCGTTGAAAGATGTCCATGAACCAACCATAGAAGATGTCCTGCTTCCTGGGAAGAACATGGTGGCAGCTGGTTACTGTATGTATGGAAGCTCTTGCACGCTTGTGTTAAGCACTGGAGCAGGTGTTAATGGTTTCACCCTTGACCCATCTCTTGGTGAGTTCATCCTAACTCACCCTAACATTAAGATCCCAAAGAAAGGTAAAATTTATTCAGTGAATGAAGGAAATGCCAAAAACTGGGATCGTCCTACTGCTACTTACGTTGAAAAATGCAAGTTTCCTGAAGATGGTTCATCACCAAAGTCTCTAAGATATATTGGAAGCATGGTAGCTGATGTTCATCGTACGTTGCTTTATGGAGGCATCTTTTTGTACCCTGCTGACAAAAAAAGTCCAAATGGAAAACTTCGTGTCCTGTATGAAGTCTTCCCAATGTCATTCTTGATGGAACAGGCAGGAGGACAGTCTTTCACGGGCAAGGAACGGGCACTTGATTTAGTTCCAACGAAGTTGCATGAGCGATCTCCCATATTCCTTGGTAGCTATGATGATGTTGAGGAAATCAAAGCTCTTTATGCTGCTGCTGAGGGTGAACAAGAATGA 1029 0.4519 MDHSADAHRTDLMTITRFVLNEQSKHPESRGDFTILLSHIVLGCKFVCSAVSKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFIKALISSGRTCILVSEEDEEAIIVEPSKRGKYCVCFDPLDGSSNIDCGVSIGTIFGVYALKDVHEPTIEDVLLPGKNMVAAGYCMYGSSCTLVLSTGAGVNGFTLDPSLGEFILTHPNIKIPKKGKIYSVNEGNAKNWDRPTATYVEKCKFPEDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQSFTGKERALDLVPTKLHERSPIFLGSYDDVEEIKALYAAAEGEQE* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1348 342 PIRSF FBPtase_SBPase 9 339 IPR000146 GO:0005975|GO:0016791
Gso16g1348 342 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC-LIKE 2 339 - -
Gso16g1348 342 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 2 339 IPR000146 GO:0005975|GO:0016791
Gso16g1348 342 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Gso16g1348 342 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Gso16g1348 342 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Gso16g1348 342 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Gso16g1348 342 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Gso16g1348 342 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Gso16g1348 342 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Gso16g1348 342 PIRSF FBPtase 9 338 IPR028343 GO:0042132
Gso16g1348 342 SUPERFAMILY Carbohydrate phosphatase 8 334 - -
Gso16g1348 342 Gene3D - 204 342 - -
Gso16g1348 342 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Gso16g1348 342 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Gso16g1348 342 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
Gso16g1348 342 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Gso16g1348 342 Gene3D - 4 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1348 Gso-Chr16 32993515 32998674 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1348 K03841 - gmx:100807451 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1348 16 32993515 32998674 Gso20g1339 20 43485055 43489924 PCT
Gso16g1348 16 32993515 32998674 Gso10g2016 10 47151607 47155988 PCT
Gso20g1339 20 43485055 43489924 Gso16g1348 16 32993515 32998674 PCT
Gso10g2016 10 47151607 47155988 Gso16g1348 16 32993515 32998674 PCT