Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1338 ATGGGGGATCGAGGTGAAGACGAGGATTTGCAAATGGCGATTCGGATGAGTATGCAGCGCGGGACGCCGGAGCCGAAGCGCAGCAAGCCGCGTGACGCTGTCGCCGATGCGGTTTCGGGGTCGCCGGAGGAGTTGCCGGAGTACAAGACCCGGCGAAGGGAGCTCATGGCGGCGGCGGCCGAGAAGCGGATGGCGGCAGCGGCGAGGGTTTCGCCTTCTCCTTCGCCGTCGCCGTCGCCGGTGAAAAAAGGCGGTGAATCAGGGAGGAGAGAGGAGGATTCGTGTTTGAAGAGTGTGAATTTGAGTAAGGAGCTTTCTGTGGAAGAAGCTAATCAATTGTTTGGTATGGTGTTTGGGAATGAAGTTTCCAAGGGCATTCTCGCACAGTGGAGCAACCAGGGAATTCGGTTTAGCTCTGATCCTGTAACATCAATGGGCCTAGTGCAGCATGAAGGCGGTCCCTGTGGCGTATTGGCAGCTATTCAAGCATTTGTGCTTAAATACATTATTTTCTTCAGTGATGAGTTGAAAGATGTGTCATGCATGTCACAGAAGGGTCCGGGTGCAGCATTTAAAAGTCAGTCTGTTCCATCATATAATTTTTCTTCGCTCACTGAAGGTGAAAAAGTAAGAGCTCTTGTAAAAAGTATGGGTGAAATTTTATTTTCATGTGGAAGTAATAGAAGGGCTGTCATTGCAACTTTGAGCATTTCCGAGAATGACATTCAGCGTTTTGAAGGGATTTCAAAGGATGAGGTTGTTTCAAAATCACTTCAAGGTCTTTCCATTGAATCTGCCTTGGATCTGCAGAAAGTTCTTAGAGTTGAAACATGCACATCACAAACAAATGCATTGCAAAGGCTTGAAGCAAATCTTCCCCTATTCCAAAGTCGAATGGGAGCATTGCTTTTCCTAATCTCTGCTTTACTTTCTCGGGGACTGGACTTGGTTCAAAGTGACAGGGATGATCCCAGCCTACCACTGGTTACTGCACCTTTTGGGCATGCCTCCCAGGAAATTGTGAACCTACTGCTCTGTGGGGAGGCTGTTCCTAATGTGTTTGATGGAAGGATGGATTTAGGAGGAGGAATGTTTGTGAAAGGTATATCCGGATATGTGGAAGTTGGATTTCTGACTCTATTAGAATCCCTGAATTTTTGCAAGGTTGGTCAGTTTCTGAAATCCCCAAAGTGGCCTATATGGGTTGTGGGGAGTGAATCCCATTACACGGTGCTGTTTGCTCTTGACCCCAGCGTTCAAAATGAGAATGAACTGGAAGGAAAGGAAACTCTGATTCGCAGAGCTTTTGATGCACAAGATCAGAGTGGAGGTGGTGGTTTCATTAGTGTGGAAGGATTCCATCAAGTCCTCAGAGAAACAAATATCAAATTTCCACCAGAGAAGCTGGAACATCTTTGCTCTTCAGGGTTCATTGTATGGAGTGAATTCTGGCAAGTAATTTTGGATCTAGACAAAAGCTTGGGAGGTTTGAAGGATTCATCCGGTTTGATGGGTAAGAAGGTTTTTGATCTATACCATTTTAATGGGATTGCCAAATCAGACCTGAACGGCAGTCAAGTAAATTCCCGGGGTGAAACTCCACTGCAAAGACCCCGGCTCACAAAATTGAGAGTTTCAGTCCCCCCAAGATGGACGCCTGAGGAATTTATGGCAGATGTGAAAGTTTCATCTGCTGCTAGTGCAAGTGAGTCTACTGGGAAGGACGACGAAGTATCTAAACCAGAGCCTTCTCAGCATGCACCTTTGGTGGACTGCATAAGGACACGCTGGGCACGTGCTGTCTGCACCTGGTCAGGGGATCCTCCTAGTATAGTTTGA 1839 0.472 MGDRGEDEDLQMAIRMSMQRGTPEPKRSKPRDAVADAVSGSPEELPEYKTRRRELMAAAAEKRMAAAARVSPSPSPSPSPVKKGGESGRREEDSCLKSVNLSKELSVEEANQLFGMVFGNEVSKGILAQWSNQGIRFSSDPVTSMGLVQHEGGPCGVLAAIQAFVLKYIIFFSDELKDVSCMSQKGPGAAFKSQSVPSYNFSSLTEGEKVRALVKSMGEILFSCGSNRRAVIATLSISENDIQRFEGISKDEVVSKSLQGLSIESALDLQKVLRVETCTSQTNALQRLEANLPLFQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGEAVPNVFDGRMDLGGGMFVKGISGYVEVGFLTLLESLNFCKVGQFLKSPKWPIWVVGSESHYTVLFALDPSVQNENELEGKETLIRRAFDAQDQSGGGGFISVEGFHQVLRETNIKFPPEKLEHLCSSGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLYHFNGIAKSDLNGSQVNSRGETPLQRPRLTKLRVSVPPRWTPEEFMADVKVSSAASASESTGKDDEVSKPEPSQHAPLVDCIRTRWARAVCTWSGDPPSIV* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1338 612 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 5 19 IPR003903 -
Gso20g1338 612 PANTHER UNCHARACTERIZED 4 611 IPR039785 GO:0004843|GO:0071108|GO:1990380
Gso20g1338 612 SUPERFAMILY EF-hand 429 488 IPR011992 -
Gso20g1338 612 MobiDBLite consensus disorder prediction 1 95 - -
Gso20g1338 612 SMART DUF4205_3 114 482 IPR025257 -
Gso20g1338 612 MobiDBLite consensus disorder prediction 45 59 - -
Gso20g1338 612 MobiDBLite consensus disorder prediction 567 586 - -
Gso20g1338 612 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 116 426 IPR025257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1338 Gso-Chr20 43469802 43480701 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1338 K22647 - gmx:100815405 1159.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1338 20 43469802 43480701 Gso10g2017 10 47158799 47169416 GST