Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2017 ATGGGGGATCGAGGAGAAGACGAGGATTTGCAAATGGCGATTCGGATGAGCATGCAGCGTGGGACGCCGGAGCCGAAGCGCAGCAAGCCGCTTGACGCCGTCGCCGGGGCGGTTTCGGGGTCGCCAGAGGAGTCTCCGGAGTACAAGACCCGGCGACGGGAGCTCATGGCGGCGGCGGCCGAGAAGCGTATGGCGGCAGCGGCGAGGGTTTCGCCTTCTCCGTCACCGTCGCCATCACCGGTGAAAAAGGGCGGTGAATTGGGGAGGAGTGAGGAAGATTCGCGTTTGAAGAGTGTGAATTTGAGTAAGGAGCTTTCTGCGGAAGAAGCTAATCAATTGTTTGGTATGGTGTTTGGGAATGAAGTTTCTAAGGGCATTCTTGCACAGTGGAGCAACCAGGGAATTCGGTTTAGCTCTGATCCTGTAACATCAATGGGCCTAGTGCAGCATGAAGGCGGTCCCTGTGGCGTTTTGGCAGCTATACAAGCATTTGTGCTTAAATACATTCTTTTCTTCAGTGATGAGTTGAAAGATGTGTCATGCATGTCACCGGAGGGTCTGGGTGCGTCATTTAAAAGTCAGTCTATTCCATCATATAATTTTTCTTCACTCACTGAAGGTGAAAAAGTAAGAGCCCTTGTAAGAAGTATGGGTGAAATTTTATTTTCATGCGGAAGTAATAGAAGGGCTGTGATTGCAACTTTGAGCATTTCCGAGAATGACATTCAGCGTTTTGAAGGGATTTCAGAAGTTGAGGTTGTTACAAAATCACTTCAAGGTCTTTCCATTGAATCTGCCTTGGATCTGCAAAAAGTTCTTAGAGTTGAAACATGCACATCACAAACAACTGCTTTGCAAAGGCTTGAAGCAAATCTTCCCCTTTTCCAAAGTCGAATGGGAGCATTGCTTTTCCTAATCTCTGCTTTACTTTCTCGAGGACTGGACTTGGTTCAAAGTGACAGGGATGATCCTAGCCTACCACTGGTTACTGCACCTTTTGGGCATGCCTCCCAGGAAATTGTGAACCTACTGCTCTGTGGGGAGGCTGTTCCTAATGTGTTTGATGGAAGGATGGATTTAGGTGGAGGAATGTTTGTGAAAGGTATATCCCGATATGTGGAAGTTGGATTTCTTACTCTATTAGAATCCCTGAATTTTTGCAAGGTTGGTCAGTTTCTGAAATCCCCAAAGTGGCCTATATGGGTTGTGGGGAGTGAATCCCATTACACAGTGTTGTTTGCTCTTGACCCCAGTGTCCAAAATGAGAATGAACTGGAAGGAAGGGAAACTCAGATTCGCAAAGCTTTTGATGCACAAGATCAGAGTGGAGGTGGTGGTTTCATTAGTGTGGAAGGGTTCCATCAAGTCCTCAGAGAAACAAATATCAAATTTCCACCAGAGAAGCTGGAACATCTTTGCTCTGCAGGGTTCATTGTATGGAGTGAATTCTGGCAAGTAATTTTGGATCTAGACAAAAGCTTGGGGGGTTTGAAGGATTCATCAGGATTGATGGGTAAGAAGGTTTTTGATCTTTACCATTTTAATGGGATTGCCAAATCGGATCTGAATGGAAGTCAAGTAAATTCTGGGGGCGAAACTCCACTGCAAAGACCCCGGCTCACAAAATTGAGAGTTTCAGTTCCCCCAAGGTGGACGCCTGAGGAATTTATGGCAGATGTGAAAGTTCCATCTGCTGCTAGTGCAAGTGAGTCTGCTGGGAAGGACAATGAAGTATCTAAACCAGAGCCTTCTAAGCATGCACCTTTGGTGGACTGCATAAGGACACGCTGGGCGCGTGCTGTCTGCAGCTGGTCAGGGGATCCTCCTAGTATAGTTTGA 1839 0.4704 MGDRGEDEDLQMAIRMSMQRGTPEPKRSKPLDAVAGAVSGSPEESPEYKTRRRELMAAAAEKRMAAAARVSPSPSPSPSPVKKGGELGRSEEDSRLKSVNLSKELSAEEANQLFGMVFGNEVSKGILAQWSNQGIRFSSDPVTSMGLVQHEGGPCGVLAAIQAFVLKYILFFSDELKDVSCMSPEGLGASFKSQSIPSYNFSSLTEGEKVRALVRSMGEILFSCGSNRRAVIATLSISENDIQRFEGISEVEVVTKSLQGLSIESALDLQKVLRVETCTSQTTALQRLEANLPLFQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGEAVPNVFDGRMDLGGGMFVKGISRYVEVGFLTLLESLNFCKVGQFLKSPKWPIWVVGSESHYTVLFALDPSVQNENELEGRETQIRKAFDAQDQSGGGGFISVEGFHQVLRETNIKFPPEKLEHLCSAGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLYHFNGIAKSDLNGSQVNSGGETPLQRPRLTKLRVSVPPRWTPEEFMADVKVPSAASASESAGKDNEVSKPEPSKHAPLVDCIRTRWARAVCSWSGDPPSIV* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2017 612 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 5 19 IPR003903 -
Gso10g2017 612 PANTHER UNCHARACTERIZED 5 611 IPR039785 GO:0004843|GO:0071108|GO:1990380
Gso10g2017 612 MobiDBLite consensus disorder prediction 562 586 - -
Gso10g2017 612 MobiDBLite consensus disorder prediction 1 100 - -
Gso10g2017 612 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 116 426 IPR025257 -
Gso10g2017 612 SUPERFAMILY EF-hand 428 488 IPR011992 -
Gso10g2017 612 MobiDBLite consensus disorder prediction 85 99 - -
Gso10g2017 612 MobiDBLite consensus disorder prediction 45 59 - -
Gso10g2017 612 SMART DUF4205_3 114 482 IPR025257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2017 Gso-Chr10 47158799 47169416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2017 K22647 - gmx:100813222 1175.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2017 10 47158799 47169416 Gso10g2017 10 47158799 47169416 ECH
Gso20g1338 20 43469802 43480701 Gso10g2017 10 47158799 47169416 GST