Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1285 ATGATGGAATCCCTTTGGAAGCTTTTGTATTTGCTGGAGCCTGCGCCTGTCACACTTATCACTACAGCTGTGGCTGTGACATTTGGTGCTGCTTTTCGAGCTCTAAACTATGGGAAAGAAATGGAGCGTAATCGGGACTTCTCTGAAGCATCGATTACATTGGATAGGTCTCAGGCATTGATGATCCCAGTGATGAGCTCTTTTAGCTTGCTTTTGATGTTCTACTTGTTCTCATCTGTCTCACAGCTTCTCACTGCATTCACTGCTGTTGCTTCTGCGTCCTCCCTTTTCTTCTGCTTGTCTCCTTATGCTGCCTATTTGAAGGCACAGTTTGGTTTAGCTGATCCATTTGTTTCACGCTGTTGTTCAAAATCTTTCACACGTATCCAAGCAATACTATTGTTAGTGTGCTCTTTCACGGTGGCTGCTTGGCTTGTTTCTGGTCATTGGATACTGAACAATTTGTTAGGCATATCTATATGCGTCGCGTTTGTAAGCCATGTGCGTCTCCCAAACATCAAAATTTGTGCAATGCTCCTTCTTTGTCTATTCGTGTATGACATTTTTTGGGTTTTCTTCTCTGAAAGATTTTTTGGTGCAAATGTCATGGTATCGGTGGCAACACAACAAGCATCAAATCCTGTGCACACCGTTGCCAATAGTATCGGTCTTCCTGGGTTGCAACTGATAACTAAGAAATTAGAGTTGCCTGTAAAGATTGTTTTTCCTAGAAATTTGTTGGGTGGTGTTGTTCCTGGAGAGAATGCGACAGACTTCATGATGCTTGGTTTAGGAGACATGGCTATCCCAGGCATGCTACTGGCTTTAGTCCTCTGCTTTGATTATCGCAAGAGCAGGGATACAGTAAATCTCTTAGAGTTACATTCCTCAAAGGGGCACAAATACATATGGTATGCGCTACCCGGGTATGCCATTGGCCTGGTAACTGCTTTGGCTGCTGGTGTCTTGACTCACTCACCTCAACCTGCACTTCTTTATCTGGTGCCTTCTACTTTGGGACCTGTAGTTGTGATCTCTTGGATGAAAAGGGAACTACTTGAGTTGTGGGAAGGAAACACCCCAAATCTCAATGATAAAGATCGCGAAATAGAAGTTTAG 1119 0.4361 MMESLWKLLYLLEPAPVTLITTAVAVTFGAAFRALNYGKEMERNRDFSEASITLDRSQALMIPVMSSFSLLLMFYLFSSVSQLLTAFTAVASASSLFFCLSPYAAYLKAQFGLADPFVSRCCSKSFTRIQAILLLVCSFTVAAWLVSGHWILNNLLGISICVAFVSHVRLPNIKICAMLLLCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSIGLPGLQLITKKLELPVKIVFPRNLLGGVVPGENATDFMMLGLGDMAIPGMLLALVLCFDYRKSRDTVNLLELHSSKGHKYIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVVVISWMKRELLELWEGNTPNLNDKDREIEV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1285 372 Pfam Signal peptide peptidase 51 359 IPR007369 GO:0004190|GO:0016021
Gso20g1285 372 PANTHER SIGNAL PEPTIDE PEPTIDASE 5 359 IPR007369 GO:0004190|GO:0016021
Gso20g1285 372 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 3 5 359 - -
Gso20g1285 372 SMART psh_8 50 349 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1285 Gso-Chr20 42913597 42917556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1285 K09598 - gmx:100794976 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1285 20 42913597 42917556 Gso10g2093 10 47887345 47891529 GST