Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2093 ATGATGGAATCCCTTTGGAAACTGTTGTACTTGCTAGAGCCTGCGCCTGTCACACTTATCATTACAGCTGTGGCTGTGACATTTGGCGCAGCATTTCGAGCTCTAAACTATGGGAAAGAAATGGAGCATAATCGTGACTTATGTGAAGCATCGATTACATTGGATAGGTCACAGGCATTGATGATCCCGGTGATGAGCTCTTTTAGCTTGCTTTTGATGTTCTACTTGTTCTCATCTGTCTCGCAGCTTCTCACTGCATTCACTGCTGTTGCTTCCGCATCCTCTCTTTTCTTCTGCTTGTCTCCTTATGTTGCCTATTTGAAGGCACAGTTTGGTTTAGCGGATCCATTTGTTTCACGCTGTTGCTCGAAATCTTTTACACGACTCCAAGCAATACTATTGTTAGTGTGCTCTTTCACTGTGGCTGCTTGGCTTGTTTCTGGTCATTGGATACTGAACAATTTGTTAGGCATATCTATATGCATCGCGTTTGTAAGCCATGTGCGTCTTCCAAACATCAAAATTTGCGCTATGCTCCTTGTTTGTCTATTCGTGTATGACATTTTTTGGGTTTTCTTCTCTGAAAGATTTTTTGGTGCAAATGTCATGGTATCAGTGGCAACACAGCAAGCATCAAATCCTGTGCACACCGTTGCCAATAGTATCGGTCTTCCTGGGTTGCAACTGATAACTAAGAAATTAGAGCTGCCTGTAAAGATTGTTTTTCCAAGAAATTTGTTGGGTGGTGTTGTTCCTGGAGAGAATGCGGCAGACTTCATGATGCTTGGTTTAGGAGACATGGCTATCCCAGGCATGCTACTGGCTTTAGTCCTCTGCTTTGATTATCGCAAGAGCAGGGATACAGTAAATCTCTTAGAATTACATTCCTCAAAGGGGCACAAATACATATGGTATGCGCTACCCGGGTATGCCATTGGCCTGGTAACTGCTTTGGCAGCTGGTGTCTTGACCCACTCACCTCAACCTGCACTTCTTTATCTGGTGCCTTCTACTTTGGGACCTGTAGTTGTGATATCTTGGATGAAAAGGGAGCTATTTGAGTTGTGGGAAGGAAACACCCCAAATCTCAATGATAAAGATCGCGAAATAGAAGTTTAG 1119 0.4352 MMESLWKLLYLLEPAPVTLIITAVAVTFGAAFRALNYGKEMEHNRDLCEASITLDRSQALMIPVMSSFSLLLMFYLFSSVSQLLTAFTAVASASSLFFCLSPYVAYLKAQFGLADPFVSRCCSKSFTRLQAILLLVCSFTVAAWLVSGHWILNNLLGISICIAFVSHVRLPNIKICAMLLVCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSIGLPGLQLITKKLELPVKIVFPRNLLGGVVPGENAADFMMLGLGDMAIPGMLLALVLCFDYRKSRDTVNLLELHSSKGHKYIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVVVISWMKRELFELWEGNTPNLNDKDREIEV* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2093 372 Pfam Signal peptide peptidase 52 359 IPR007369 GO:0004190|GO:0016021
Gso10g2093 372 PANTHER SIGNAL PEPTIDE PEPTIDASE 5 359 IPR007369 GO:0004190|GO:0016021
Gso10g2093 372 SMART psh_8 50 349 IPR006639 GO:0004190|GO:0016021
Gso10g2093 372 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 3 5 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2093 Gso-Chr10 47887345 47891529 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2093 K09598 - gmx:100786631 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2093 10 47887345 47891529 Gso10g2093 10 47887345 47891529 ECH
Gso20g1285 20 42913597 42917556 Gso10g2093 10 47887345 47891529 GST