Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1270 ATGACAGAGGAGCAATTAAAAAAGGTGGCTCAGACTGAGAGTATTTCCCCTAATCCTGCACCTGAACCTGAACCTGAACCTGCTGTTCCAAAAGAGGAAGTGGCTGAGGAGAAATCTGTAATTCCACAACCCTCTTCCTCTCCTTCTGATGAGTCCAAAGCTCTTGTCATAGTTGAGAAGACTAGTGAAGTTGCTCAAGAGAAACCAATTGAGGGGTCTGTGAACCGAGATGCTGTCCTTGCGAGAGTTGCAACTGAGAAGAGGCTGTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCAAAATCAGAGAACAAGTCTCACAAAAAGCTTTCAGTCATTTCAGCATGGGAGAACAGTATGAAAGCTGCAGCGGAGGCAGAATTGAGAAAGATTGAAGAACAACTGGAGAAGAAAAAAGCAGAATATGGAGAGAAATTGAAAAACAAAATAGCTACAATCCACCGAGAAGCTGAAGAAAAGAGGGCATTTATTGAGGCCCAAAAAGGGGAAGATTTCTTGAAGGCAGAGGAGACAGCTGCAAAGTACAGGGCAACTGGAACAGCCCCAACGAAACTCTTTGGTTGTTTCTAA 594 0.436 MTEEQLKKVAQTESISPNPAPEPEPEPAVPKEEVAEEKSVIPQPSSSPSDESKALVIVEKTSEVAQEKPIEGSVNRDAVLARVATEKRLSLIKAWEESEKSKSENKSHKKLSVISAWENSMKAAAEAELRKIEEQLEKKKAEYGEKLKNKIATIHREAEEKRAFIEAQKGEDFLKAEETAAKYRATGTAPTKLFGCF* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1270 197 Pfam Remorin, C-terminal region 87 192 IPR005516 -
Gso20g1270 197 PANTHER OS02G0117200 PROTEIN 1 197 - -
Gso20g1270 197 PANTHER REMORIN 1.4 1 197 - -
Gso20g1270 197 MobiDBLite consensus disorder prediction 1 54 - -
Gso20g1270 197 Coils Coil 122 153 - -
Gso20g1270 197 Pfam Remorin, N-terminal region 32 83 IPR005518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1270 Gso-Chr20 42747624 42750491 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1270 - - gmx:100791464 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1270 20 42747624 42750491 Gso10g2107 10 48090875 48093694 GST
Gso20g1270 20 42747624 42750491 Gso16g1528 16 35613692 35617111 PCT
Gso20g1270 20 42747624 42750491 Gso9g1151 9 32966926 32969897 PCT