Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2107 ATGACAGAGGAGCAATCCAAAAAGGTGGCTGAGACTGAGAGTTTTCCCTCTAATCCTGCACCTGAACCTGTTGTTGTTCCAAAGGAGGATGTGGCAGAGGAGAAATCTGTAATTCCACAACCCTCTCCCTCTCCTGCTGATGAGTCCAAAGCTCTTGTCATAGTTGAGAAGACTAGTGAAGTTGCTGAAGAGAAACCGATTGAGGGGTCTGTGAACCGAGATGCTGTGCTTGCAAGAGTTGCAACCGAGAAGAGGCTGTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCCAAAGCAGATAACAAGTCTCACAAAAAGCTTTCAGCCATTTCAGCATGGGAAAACAGCAAGAAAGCTGCAGCGGAGGCAGAATTGAGAAAGATTGAAGAACAACTGGAGAAGAAAAAAGCAGAATATGGAGAGAAATTGAAAAACAAAATAGCTACAATCCACCGAGAAGCTGAAGAAAAGAGAGCATTTATTGAGGCCCAAAAAGGGGAAGAATTCTTGAAGGCAGAGGAGACTGCTGCAAAGTACAGGGCAACTGGAACAGCCCCAACGAAACTCTTTGGTTGTTTCTAA 585 0.4444 MTEEQSKKVAETESFPSNPAPEPVVVPKEDVAEEKSVIPQPSPSPADESKALVIVEKTSEVAEEKPIEGSVNRDAVLARVATEKRLSLIKAWEESEKSKADNKSHKKLSAISAWENSKKAAAEAELRKIEEQLEKKKAEYGEKLKNKIATIHREAEEKRAFIEAQKGEEFLKAEETAAKYRATGTAPTKLFGCF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2107 194 Pfam Remorin, C-terminal region 84 189 IPR005516 -
Gso10g2107 194 Pfam Remorin, N-terminal region 29 80 IPR005518 -
Gso10g2107 194 MobiDBLite consensus disorder prediction 1 50 - -
Gso10g2107 194 PANTHER REMORIN 1.4 3 194 - -
Gso10g2107 194 Coils Coil 119 150 - -
Gso10g2107 194 PANTHER OS02G0117200 PROTEIN 3 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2107 Gso-Chr10 48090875 48093694 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2107 - - gmx:100305501 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0638 7 6799651 6803992 Gso10g2107 10 48090875 48093694 ECH
Gso1g1851 1 55282187 55285107 Gso10g2107 10 48090875 48093694 ECH
Gso10g2107 10 48090875 48093694 Gso10g2107 10 48090875 48093694 ECH
Gso20g1270 20 42747624 42750491 Gso10g2107 10 48090875 48093694 GST
Gso10g2107 10 48090875 48093694 Gso16g1528 16 35613692 35617111 PCT
Gso10g2107 10 48090875 48093694 Gso9g1151 9 32966926 32969897 PCT