Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1253 ATGGCAAGAGATCTTGAAAGTGGCGGTGGAGGAACCAAGAATAACAGAACTGCAGAGGAAAACTACTCTGCACCTGAATCTTCCCATGTTTATGATTCTGAGACCCATTGGACATCATGGCTCGTGCCTATGTTTGTGGTTGCTAATATTGCTGTCTTTGTTATTACCATGTACATCAACAATTGTCCCAGGAACAACCTTCGTTTCCAAGGTCGCTGCGTGGCCAGGTTCCTTGGAAGGTTCTCTTTTCAGCCTATGCAGGAGAATCCCTTGCTTGGTCCTTCTTCTTCAACATTGACCAAGATGGGAGCCCTTCGATGGGATAATGTTGTGAATAGACATCAGGGATGGAGACTCTTCACTTGCATTTGGTTACATGCTGGGGTTATTCATTTGCTAGCTAATATGTTGAGTCTGGTCTTCATTGGCATTCGCCTTGAACAGCAATTCGGATTTATTAAGATTGGAATCATATACTTGGTGTCCGGGTTTGGTGGAAGTGTACTGTCGTCTCTATTTATCAGAGACCACATCTCTGTTGGTGCTTCTGGTGCCCTTTTTGGACTTCTTGGCGCAATGCTGTCTGAACTTATCACAAACTGGACTATATATTCCAATAAAGCAATGGCTTTAATAACCCTTCTAGTGATCATTGTGATCAACCTTGGCATTGGCATTTTGCCACACGTAGATAATTTTGCTCACATTGGAGGATTCCTGGTGGGATTTCTCCTTGGTTTTATTTTGCTGCCACGTCCTCAGTTCAGTTGGTTAGAGCAGCGACGTCTTCCTGCTGGTGTTGGGATGAAGTCAAAGTACAAGGCTTACCAATATGTTCTATGGATTGTGTCTCTTATTCTGTTGATTGCAGGGTTATCGACTGCATTGGTGATGCTATTTCGGGGTGAGAAAGGGTATGACCACTGCCATTGGTGTCGCTACTTAACATGTGTCCCTACTTCTAAATGGGAATGCAGCAATGACGGTTAA 990 0.4394 MARDLESGGGGTKNNRTAEENYSAPESSHVYDSETHWTSWLVPMFVVANIAVFVITMYINNCPRNNLRFQGRCVARFLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRHQGWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSSLFIRDHISVGASGALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHVDNFAHIGGFLVGFLLGFILLPRPQFSWLEQRRLPAGVGMKSKYKAYQYVLWIVSLILLIAGLSTALVMLFRGEKGYDHCHWCRYLTCVPTSKWECSNDG* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1253 329 MobiDBLite consensus disorder prediction 10 25 - -
Gso20g1253 329 PANTHER RHOMBOID-LIKE PROTEIN 3 17 327 - -
Gso20g1253 329 Gene3D - 32 252 IPR035952 -
Gso20g1253 329 MobiDBLite consensus disorder prediction 1 25 - -
Gso20g1253 329 PANTHER RHOMBOID-RELATED 17 327 IPR002610 GO:0004252|GO:0006508|GO:0016021
Gso20g1253 329 SUPERFAMILY Rhomboid-like 37 254 IPR035952 -
Gso20g1253 329 Pfam Rhomboid family 111 253 IPR022764 GO:0004252|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1253 Gso-Chr20 42577655 42580870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1253 - - gmx:100784224 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1253 20 42577655 42580870 Gso10g2124 10 48258014 48261201 GST