Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2124 ATGGCAAGAAGAGATCTTGAAAGTGGCGGTGGAGTAACCAAGAACAACAGAAGTGCAGAGGAAAACTACTCTGCGCCCGAATCTTCCCATGTTTATGATTCTGAGACCCATTGGACATCATGGCTCGTGCCCATGTTTGTGGTTGCTAATATTGCTGTCTTTGTTATTACCATGTACATCAACAATTGTCCCAGGAACAACCTTCGTTTCCAAGGTCGCTGCGTGGCAAGGTTTCTTGGAAGGTTCTCTTTTCAGCCTATGCAGGAGAATCCCTTGCTTGGTCCTTCTTCTTCAACATTGACCAAGATGGGAGCTCTTCGATGGGATAATGTTGTGAATAGACATCAGGGATGGAGACTTGTCACTTGCATTTGGTTACATGCTGGGGTTATTCATTTGCTGGCTAATATGTTGAGTCTGGTCTTCATTGGCATTCGCCTTGAACAACAATTCGGGTTTATTAAGATTGGAATCATATACTTGGTGTCTGGGTTTGGTGGAAGTGTACTGTCGTCTCTATTTATCAGAGACCACATCTCTGTGGGTGCTTCTGGTGCCCTTTTTGGACTTCTTGGCGCAATGCTGTCTGAACTTATCACAAACTGGACTATATATTCCAATAAAGCAATGGCTTTAATAACCCTTCTAGTGATCATTGTAATCAACCTTGGCATTGGCATTTTGCCACACGTAGATAATTTTGCTCACATCGGAGGATTCCTGGTGGGATTACTCCTTGGCTTTATTTTGCTGCCACGTCCTCAGTTCGGTTGGTTAGAGCAGCGACGTCTTCCTGCCGGTGTTCAGATGAAGTCAAAGTACAAGACTCACCAATATGTTCTAGGGGTTGTGTCTCTTATTCTGTTGATTGCAGGGTTATCGACTGCATTGGTGATGCTATTTCGGGGTGAGAAAGGGTATGACCACTGCCATTGGTGTCGCTACTTAACATGTGTCCCTACTTCTAAATGGGAATGCAGCAATGACAGTTAA 993 0.4431 MARRDLESGGGVTKNNRSAEENYSAPESSHVYDSETHWTSWLVPMFVVANIAVFVITMYINNCPRNNLRFQGRCVARFLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRHQGWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSSLFIRDHISVGASGALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHVDNFAHIGGFLVGLLLGFILLPRPQFGWLEQRRLPAGVQMKSKYKTHQYVLGVVSLILLIAGLSTALVMLFRGEKGYDHCHWCRYLTCVPTSKWECSNDS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2124 330 Pfam Rhomboid family 112 254 IPR022764 GO:0004252|GO:0016021
Gso10g2124 330 PANTHER RHOMBOID-RELATED 1 328 IPR002610 GO:0004252|GO:0006508|GO:0016021
Gso10g2124 330 Gene3D - 32 253 IPR035952 -
Gso10g2124 330 MobiDBLite consensus disorder prediction 1 26 - -
Gso10g2124 330 PANTHER RHOMBOID-LIKE PROTEIN 3 1 328 - -
Gso10g2124 330 MobiDBLite consensus disorder prediction 11 26 - -
Gso10g2124 330 SUPERFAMILY Rhomboid-like 38 255 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2124 Gso-Chr10 48258014 48261201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2124 - - gmx:100809265 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2124 10 48258014 48261201 Gso10g2124 10 48258014 48261201 ECH
Gso20g1253 20 42577655 42580870 Gso10g2124 10 48258014 48261201 GST