Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1217 ATGGGACACGTGTCAGTCCATATTCTCTATCCCCATCCCCGCATACCCTATCATCTTCACTTCACACAACCACGCTTTAAACCCAACACTTTCCCATCCCCATACTCCTCCACGCAACCCACTTTTCCGGTCCAATTTCGCCGGAATACTCGTTCCCTCTCTCTCATGCTTCCGAAATCAGTTCCCCCAGCGGAACCCCAACCCCAAACACTTAATACCAAAACCACCCTCACTTCTTTCTTCACCTCCCTCCTCCAACCCCGTTTCTCCCCCCAAAACCCTCGCACATGGATCCTCTTCACCGTCCTCTTCATCCAGATCCTCCTCCTCTGCAACCTCCGTAGCTTCCCCTCCCCCTCAATCCCCCCTCCCCTCCCCGCCGCCGCCGACACCACCACCACCACCACCACCACCGTGCACCACTCCTCCCGCACCGTAGACCATTGCGGCTCCGGCAAGGTCTTCGTCTACAACCTCCCCGATACCTTCAACCAACAAATTATTCTCAATTGCGACAACCTCAACCCCTGGAGCTCCCGTTGCGACGCCCTCTCCAACGACGGCTTCGGGCGCGCCGCCACCTCCCTCGCTGGAATCGTCCCGGAGGATCTTCTCCCGGCGTGGCACTGGACTGACCAGTTCGTAACCGAAATCATTTTCCACAACAGATTAATAAACCACAAATGTAGGGTTATGGAGCCTGAATCCGCTACGGCGTTCTACATCCCATTCTACGCTGGACTCGCGGTGGGGAAGTACCTCTGGTTCAACTCCACCGCAGAGGAGCGCGATCGCCACTGCGACATGATGCTGCAATGGATTCAGGACCAACCGTTTTTTAAAAGATCAAACGGTTGGGATCATTTTATTACCATGGGCCGCATCACGTGGGATTTTCGCCGCTCCAAGGACAGGGATTGGGGTTCTAGCTGCATCTACAAGCCAGGGATAAGAAACGTCACGCGCCTTCTCATCGAGCGTAACCCTTGGGACTATTTTGATGTAGGTGTTCCCTACCCCACCGGATTCCACCCCCGCTCCAAATCCGACGTCACGCGCTGGCAGAGCTTCGTCCGCGAGCGTCAGCGCCACGCGCTCTTCTGCTTCGCCGGCGCGCCTCGCCGCGCCTTCCGCGACGACTTCCGCGCGATTCTGCTGAGTCAGTGCCGCGACTCGGGTGAGTCGTGCCGCGCCGTGAACTGCACCGGGACGCGGTGCTCCAACGGCACGTCGGCGATTCTGGAAACTTTTCTGGACTCGGATTTCTGCTTGCAGCCGAGGGGGGACAGCTTCACGCGCCGGTCCATTTTCGACTGCATGGTGGCCGGTTCGATTCCGGTTTTTTTCTGGCGGCGAACCGCGTATTTGCAGTACGAGTGGTTCTTACCGGGTGAACCGGAGAGTTACTCGGTTTTCATAGACCGTAACGCGGTGAAGAATGGGACCTTAACCGTGAAAAACGTGCTCGAGAGGTTCACGAAGGAGGAGGTGAGGAGAATGAGGGAGAAAGTGATTGAGTACATTCCGAGGTTGGTTTACGCGAACACGAAACAAGGGTTAGAGGGTGTGAATGATGCTTTCGATGTTGCCATCGAAGGAGTGTTCAAAAGGATTAAGGAACAGGAACAACCGCAGTTTCATAAGTGGAAATAA 1653 0.5584 MGHVSVHILYPHPRIPYHLHFTQPRFKPNTFPSPYSSTQPTFPVQFRRNTRSLSLMLPKSVPPAEPQPQTLNTKTTLTSFFTSLLQPRFSPQNPRTWILFTVLFIQILLLCNLRSFPSPSIPPPLPAAADTTTTTTTTVHHSSRTVDHCGSGKVFVYNLPDTFNQQIILNCDNLNPWSSRCDALSNDGFGRAATSLAGIVPEDLLPAWHWTDQFVTEIIFHNRLINHKCRVMEPESATAFYIPFYAGLAVGKYLWFNSTAEERDRHCDMMLQWIQDQPFFKRSNGWDHFITMGRITWDFRRSKDRDWGSSCIYKPGIRNVTRLLIERNPWDYFDVGVPYPTGFHPRSKSDVTRWQSFVRERQRHALFCFAGAPRRAFRDDFRAILLSQCRDSGESCRAVNCTGTRCSNGTSAILETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRTAYLQYEWFLPGEPESYSVFIDRNAVKNGTLTVKNVLERFTKEEVRRMREKVIEYIPRLVYANTKQGLEGVNDAFDVAIEGVFKRIKEQEQPQFHKWK* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1217 550 Coils Coil 550 550 - -
Gso20g1217 550 Pfam Exostosin family 149 482 IPR040911 -
Gso20g1217 550 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 69 543 IPR004263 GO:0006486|GO:0016757
Gso20g1217 550 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE XLT2 69 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1217 Gso-Chr20 42153166 42155567 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1217 - - gsj:114403132 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1217 20 42153166 42155567 Gso10g2161 10 48637387 48639233 GST