Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2161 ATGCTTCCGAAATCAGTTCCCTCAGCGGTACCCCAACCCAAAACACTTGCTTCCAAAATCACCCTAACTTCTTCCCTCACCTCCCTCCTCCAACCCCAAAACCCTCGCACATGGATCCTCTTCACCGTCCTCTTCATCCAGATCCTCCTCCTCTGCAACCTCCATAGCTTCCCTTCCTCAATTCCCCCTCCCCTCTCTCCCATCCCCGCCGCCACCGACACCGACACCGACACCATCACCACCACCGTACACCACTCCACCCGCACCCTCGACCAATGCGGCTCCGGCAAGGTCTTCGTCTACGACCTCCCCCAAACCTTCAACAACGAAATCCTCCTCCATTGCGACAACCTCAACCCCTGGAGCTCCCGCTGCGACGCCCTCTCCAACGACGCCTTCGGCCGAAGCGCCGCTGCGCTCGCCGGAATCGTCCCGGAGGATCTCCTCCCGGCGTGGCACTGGACTGACCAGTTCGTAACCGAAATCATATTCCACAACAGATTAATAAACCACAAGTGTAGGGTTATGGAACCTGAATCCGCTACGGCGTTCTACATGCCGTTCTACGCTGGACTCGCGGTGGGGAAGTACCTCTGGTTCAACTCCACCGCAGAGGAACGCGATCGCCACTGCGACATGATGCTGCAATGGATTCAGGACCAACCGTTTTTTAAAAGATCAAACGGTTGGGATCATTTTATCAGCATGGGCCGCATCACGTGGGATTTTCGCCGCTCCAAGGACAAGGATTGGGGTTCTAGCTGCCTCTACAAGCCAGGGATAAGAAACGTCACGCGCCTTCTCATCGAGCGTAACCCTTGGGACTATTTTGACGTAGGTGTTCCCTATCCCACCGGATTCCACCCCCGCTCAAAATCCGACGTTACGCGCTGGCAGAGCTTCCTTCGAGAGCGTCAGCGCCACGCGCTCTTCTGCTTCGCCGGCGCGCCGCGCCGCGCCTTCCCCGACGACTTTAGGGGACTTCTGCTGAGTCAGTGCCGCGACTCGGGCGAGTCGTGCCGCGCCGTGAACTGCACCGGGACGCGGTGCTCCAACGGCACGTCGGCGATTATGGAAACCTTTCTAGACTCGGATTTCTGCTTGCAGCCGAGAGGGGACAGCTTCACGCGCCGCTCCATTTTTGACTGCATGGTGGCCGGTTCGATTCCGGTTTTTTTCTGGCGGCGAACCGCGTATTTGCAGTACGAGTGGTTCTTGCCGGTCGAACCGGAGAGTTATTCGGTTTTCATAGACCGGAACGCGGTGAAGAATGGAACCTTAACCGTGAAAAACGTGCTCGAGAAGTTCACGAAAGAGGAGGTGAGGAAGATGAGGGAGAAAGTAATTGAGTACATTCCGAGGTTGGTTTACGCAAACACGAAACAAGGGTTAGATGGTGTGGAGGACGCTTTCGATGTTGCCATCGAAGGAGTGTTCAAAAGGATTAAGGAACAGGAACAACCGCAGTTTCATAAGTGGAAATAA 1485 0.5582 MLPKSVPSAVPQPKTLASKITLTSSLTSLLQPQNPRTWILFTVLFIQILLLCNLHSFPSSIPPPLSPIPAATDTDTDTITTTVHHSTRTLDQCGSGKVFVYDLPQTFNNEILLHCDNLNPWSSRCDALSNDAFGRSAAALAGIVPEDLLPAWHWTDQFVTEIIFHNRLINHKCRVMEPESATAFYMPFYAGLAVGKYLWFNSTAEERDRHCDMMLQWIQDQPFFKRSNGWDHFISMGRITWDFRRSKDKDWGSSCLYKPGIRNVTRLLIERNPWDYFDVGVPYPTGFHPRSKSDVTRWQSFLRERQRHALFCFAGAPRRAFPDDFRGLLLSQCRDSGESCRAVNCTGTRCSNGTSAIMETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRTAYLQYEWFLPVEPESYSVFIDRNAVKNGTLTVKNVLEKFTKEEVRKMREKVIEYIPRLVYANTKQGLDGVEDAFDVAIEGVFKRIKEQEQPQFHKWK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2161 494 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE XLT2 20 487 - -
Gso10g2161 494 Pfam Exostosin family 93 426 IPR040911 -
Gso10g2161 494 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 20 487 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2161 Gso-Chr10 48637387 48639233 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2161 - - gsj:114372230 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2161 10 48637387 48639233 Gso10g2161 10 48637387 48639233 ECH
Gso20g1217 20 42153166 42155567 Gso10g2161 10 48637387 48639233 GST