Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g1216 ATGGAGAAGACAGCAGTTAAAGTTCGATGCCAGAGGATTGGGTGCGACGCCATGTTCTCCGAGGCCGACAACCCCGACGGTTCCTGTCGATACCATGATTCGGGACCTATATTTCATGATGGAACAAAAGAATGGAGTTGTTGCAAGAAAAGAAGTCATGATTTTAGCTTGTTTTTGGAAATTCCAGGATGCAAGACAGGAAAACATACAACAGTTAAGCAAGTTATTACACCAGTGAAGAAGAACACCATGCCCTCTCCAACTGCTGTTTCTTCTACCAATGCATCATCAAAGGAGTCTTGTCCCAGATGTCGGCAGGGTTTCTTTTGCTCAAATCACGGCTCGCAAAGCAAACCTGTAAATGTTGTTGGAGACAAGGCTGCAAATCTTGCTGGAGATGTCTCTGCTGATAATAATTCAAGTGTTGAGGCTCCGAAACCTAAGAAGATAGTTGATATAAATGAAGCCCAAGTATGTAAAAATAAAGGATGCGGTCAAACTTTCAAGGAAAAGGATAATCATGACACTGCTTGCAACTACCATCCTGGCCCTGCTGTTTTTCATGACCGGATGAGAGGGTGGAAGTGCTGTGATATTCATGTAAAAGAATTTGATGAGTTTATGAGCATTCCTCCGTGTGCAAAGGGATGGCATAATGCGGATCCAGAGTCCTGA 675 0.4356 MEKTAVKVRCQRIGCDAMFSEADNPDGSCRYHDSGPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKHTTVKQVITPVKKNTMPSPTAVSSTNASSKESCPRCRQGFFCSNHGSQSKPVNVVGDKAANLAGDVSADNNSSVEAPKPKKIVDINEAQVCKNKGCGQTFKEKDNHDTACNYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g1216 224 Pfam CHORD 158 218 IPR007051 -
Gso20g1216 224 Pfam CHORD 9 69 IPR007051 -
Gso20g1216 224 ProSiteProfiles CHORD domain profile. 10 69 IPR007051 -
Gso20g1216 224 ProSiteProfiles CHORD domain profile. 159 218 IPR007051 -
Gso20g1216 224 Gene3D - 1 73 - -
Gso20g1216 224 Gene3D - 150 221 - -
Gso20g1216 224 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 3 223 IPR043316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g1216 Gso-Chr20 42139397 42144552 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g1216 K13458 - gmx:100819671 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1216 20 42139397 42144552 Gso10g2162 10 48648629 48653267 GST