Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2162 ATGGAGAAGACAGCAGTTAAAGTTCGATGCCAGAGGATTGGGTGCGACGCCATGTTCTCCGAGGACGACAACCCCGACGGTTGCTGTCGATACCATGATTCGGGACCTATATTTCATGACGGGACAAAAGAATGGAGTTGTTGCAAGAAAAGAAGTCATGATTTTAGCTTGTTTTTGGAAATTCCAGGATGCAAGACAGGAAAACATACAACAGTTAAGCAAGTAATTACACCAGTGAAGAAGAACACCATGCCTTCTCCAACCGCTGTTTGTTCAACCAATGCATCATCAAAGGACTCTTGTCCCAGATGTCAGCAGGGTTTCTTTTGCTCAGATCATGGCTCACAAAGCAAACCTGCAAATATTATTGGAGACAAGGCCGCAAATCTGGCTGGAGATGCATCTGTTGATAACAATTCAAGTGTTCATGCTCCGAAACCTAAGAAGATAGTTGATATAAATGAGCCACAAGTATGTAAAAATAAAGGATGCGGTCAAACTTTCAAGGAAAAGGATAATCATGACACTGCTTGCAGCTACCACCCTGGCCCTGCTGTTTTTCATGACCGGATGAGAGGGTGGAAGTGCTGTGATATTCATGTAAAAGAATTTGATGAGTTTATGAGCATTCCTCCGTGCGCAAAGGGATGGCATAATGCGGATCCAGAGTCCTGA 675 0.4385 MEKTAVKVRCQRIGCDAMFSEDDNPDGCCRYHDSGPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKHTTVKQVITPVKKNTMPSPTAVCSTNASSKDSCPRCQQGFFCSDHGSQSKPANIIGDKAANLAGDASVDNNSSVHAPKPKKIVDINEPQVCKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCAKGWHNADPES* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2162 224 Gene3D - 1 73 - -
Gso10g2162 224 Gene3D - 151 221 - -
Gso10g2162 224 Pfam CHORD 9 69 IPR007051 -
Gso10g2162 224 Pfam CHORD 158 218 IPR007051 -
Gso10g2162 224 ProSiteProfiles CHORD domain profile. 10 69 IPR007051 -
Gso10g2162 224 ProSiteProfiles CHORD domain profile. 159 218 IPR007051 -
Gso10g2162 224 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 3 223 IPR043316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2162 Gso-Chr10 48648629 48653267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2162 K13458 - gmx:100194419 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2162 10 48648629 48653267 Gso10g2162 10 48648629 48653267 ECH
Gso20g1216 20 42139397 42144552 Gso10g2162 10 48648629 48653267 GST