Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1755 ATGATGCAGATCAGCTCCACCGTACCAGCCCACAACCTTCACAAGTTCCAAGCAATAAGGTGCCCCAGCTTCAGCTTCAGATGCCAACAAGCTTCCTCTTCCACCTTTCAGAAGCCCTTCATCTCCACCGAGTCAACTCGCTTGCACCTCGCCAACCTCCACAAACTCCTCGAGACCCAGAAGCCCGAGGTCCCTCCACCCACCCAAATCCAACACCACCAGCCAATCATTAACGATCCAAAGGAAAAGAAAGGAAGAAGCTTTCTGGAGGGTCTCAACTTGGCCAGGCTATGGCCGGAGATGAAAGCCACCGATGAAATGTCCCCGCGCCACCTCAAACGCCTCCAGCGCCTCCTCTCCATGACGGCGGAGTATTCCCCGAGGAACATCCTCGGCGGCCGCTGGAGAGAATACCACGGCAGCAACGACTGGAAAGGGATGTTGGACCCTCTCGACGAGAATCTCCGGCGAGAGGTCGTCCGCTACGGCGAATTCGTCCAAGCCGCGTATCAAGCCTTCCATTCAGACCCCGCCATGTCAACGGAGGAGCCGCCACACACCCAACACGTGGCACTTCCCGATAGATCCTACCGAATGACCAAAAGCCTCTACGCCACGTCATCCATTGGTTTACCCAAATGGGTAGATGACGTGGCACCGGATCTAGGATGGATGACCCAACGATCAAGTTGGGTGGGATATGTAGCCGTTTGCGAGGACAGGAGAGAGATAACACGAATGGGAAGAAGAGACATTGTGATCTCTCTCAGGGGAACTTCCACGTGTCTAGAATGGGCCGAAAATCTCAGGGCTCATATGATTGACATGCCCGACAACGATAGCTCAGAAGAAGCCCAAGGAAAGCCCAAAGTGGAGTGTGGGTTCATGAGCTTGTACAAAACAAAAGGAGCACAAGTGCCAAGTCTAGCAGAATCCGTAGTAGAAGAAGTGAGGAGACTGATCGATCTATACAAAGGTGAAGAGTTGAGCATCAGTGTGATAGGGCACAGCCTTGGGGCGACGCTAGCCTTATTGGTGGCTGAGGAGATAAGCACGTGTTGCCCCCAAGTGCCACCCGTGGCTGTTTTTTCCTTCGGTGGGCCTCGCGTGGGTAACAAGGCCTTTGGGGATCGCTTAGCTGCCAAAAACGTCAAGGTGCTGAGAATAGTGAACTCGCAAGACGTGATTACTAGGGTTCCAGGGATCTTCGTGAGCGAAGAGCTTGAACAGAAAATACGGAACGTTGGTGGGGGTGTGTTGGAGGAGAACACGCCCTTAGCATACTCGCACGTGGGAACAGAGCTGCGTGTGCACACCAAGATGTCGCCATATCTTAAGCCCGATGCTGACATGGCGTGTTGTCATGACTTGGAGGCTTACTTGCACTTGGTGGATGGGTTCTTGGCCTCCAATTGTCCTTTCAGATCCAATGCTAAGAGAAGCTTGGCTAGGTTAATGCAAGACCAAAGTGCCAATGTAAAGAAGTTGTATACTAGCAAGGCAAAATCCCTCACTGTCAATCTTAGTAGGCAGGGATCTATGTCTATGTCTAATTGTTTGCCTAGTCCATCTTAA 1575 0.5225 MMQISSTVPAHNLHKFQAIRCPSFSFRCQQASSSTFQKPFISTESTRLHLANLHKLLETQKPEVPPPTQIQHHQPIINDPKEKKGRSFLEGLNLARLWPEMKATDEMSPRHLKRLQRLLSMTAEYSPRNILGGRWREYHGSNDWKGMLDPLDENLRREVVRYGEFVQAAYQAFHSDPAMSTEEPPHTQHVALPDRSYRMTKSLYATSSIGLPKWVDDVAPDLGWMTQRSSWVGYVAVCEDRREITRMGRRDIVISLRGTSTCLEWAENLRAHMIDMPDNDSSEEAQGKPKVECGFMSLYKTKGAQVPSLAESVVEEVRRLIDLYKGEELSISVIGHSLGATLALLVAEEISTCCPQVPPVAVFSFGGPRVGNKAFGDRLAAKNVKVLRIVNSQDVITRVPGIFVSEELEQKIRNVGGGVLEENTPLAYSHVGTELRVHTKMSPYLKPDADMACCHDLEAYLHLVDGFLASNCPFRSNAKRSLARLMQDQSANVKKLYTSKAKSLTVNLSRQGSMSMSNCLPSPS* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1755 524 SUPERFAMILY alpha/beta-Hydrolases 156 467 IPR029058 -
Gso1g1755 524 MobiDBLite consensus disorder prediction 63 83 - -
Gso1g1755 524 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 2 510 - -
Gso1g1755 524 CDD Lipase_3 155 465 - -
Gso1g1755 524 Pfam Lipase (class 3) 253 402 IPR002921 GO:0006629
Gso1g1755 524 Gene3D alpha/beta hydrolase 134 517 IPR029058 -
Gso1g1755 524 PANTHER GLYCEROLIPASE A1 2 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1755 Gso-Chr1 54348797 54350509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1755 26 524 Acyl Lipid Metabolism Gene Families AT4G16820 58.708 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1755 - - gmx:100806573 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1755 1 54348797 54350509 Gso11g0319 11 2701577 2703287 GST
Gso1g1755 1 54348797 54350509 Gso20g1085 20 40600536 40605832 PCT
Gso1g1755 1 54348797 54350509 Gso10g2271 10 49780153 49783767 PCT