Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0319 ATGATGCAGATCAGCTCCACCGTACCAGCCCACAAACTTCACAAGTTCCAGGCAATAAGGTGCCCCAGCTTCAGCTTCAGATGCCAACAAGCTTCCTCTTCCTCCCTCAAACAACCTTCAATTTTTCAGACGAAGCCCTTCATCTCCACCGAGTCAACTCGCCTGCACCTCGCCAACCTCGACAAGCTCCTCGAGACCCAGAAGCCCGTGGTCCCACCAACCCAAATCCAACACCAACCAATCATCAACGATCCAAAGGAAAAGAAAGGAAGAAGCTTTTTGGAGGGTCTTGACTTGGGGAGGCTATGGCCGGAGATGAAAGCCACCGATGAAATGTCCCCGCGCCACCTCAAACGCCTCCAGCGCCTCCTCTCCATGACGGGGGAGTATTCCCCGAGGAACATCCTCGGCGGCCGCTGGAGAGAATATCACGGCAGCAACGACTGGAAAGGGATGTTAGACCCTCTAGACGAGAATCTCCGGCGAGAGGTCGTTCGCTACGGCGAATTCGTCCAAGCCGCGTATCAAGCCTTCCATTCAGACCCCGCCATGTCAACGGAGGAGCCGCCACATCCACAACACGTGGCACTTCCAGATAGATCATACCGAATGACCAAAAGCCTCTATGCAACATCATCAATTGGTTTACCCAAATGGGTAGATGAAGTGGCACCGGATCTGGGATGGATGACCCAGAGATCAAGCTGGGTCGGATACGTGGCTGTTTGCGAGGATAGAAGAGAAATAGCACGGATGGGAAGAAGAGACATTATAATCTCTCTTCGTGGAACTTCCACGTGTATGGAATGGGCGGAGAATCTCAGGGCCCATATGGTGGAAATGGGAGACGAAGAAGGAAAAGCCAAAGTAGAGTGCGGGTTCATGAGCTTGTACAAAACAAAAGGAGCACAGGTGGCGAGTCTGGCAGAATCCGTTGTAGAAGAAGTGAGGAGACTGATTGATCTTTACAGAGGAGAAGAGTTGAGCATCAGTGTGATAGGGCACAGCCTTGGTGCGACGCTAGCCTTATTGGTGGCAGACGAGATAAGCACGTGCTGCCCCAAAGTTCCACCCGTGGCTGTTTTCTCCTTCGGAGGGCCTCGTGTTGGTAACAAGGCCTTTGGGGATCGCTTAACCGCTAAAAACGTCAAAGTTCTAAGAATAGTGAACTCGCAAGACGTGATTACCAGAGTTCCAGGGATCTTTGTGAGTGAAGAGCTAGAACAAAAAATACGGAACGTTGGTGGTGGTGTGCTGGAGGAGAACACGCCGCTGGCTTACTCGCACGTGGGGACGGAGTTGCGTGTGCAGACCAAGATGTCGCCGTACCTTAAGCCCGATGCTGACATGGCCTGTTGTCATGACTTGGAGGCTTACTTGCACTTGGTGGATGGGTTCTTGGCCTCAAATTGTCCCTTCAGATCAAATGCTAAAAGAAGCTTAGCTAGGTTAATGCAAGACCAAAGTGCTAATGTCAAAAAATTGTATACTAGCAAAGCTAAATCCTTGACTGTCAATCTTAGTAGGCAGGGATCCATGTCTATGTCTAGTTGTTTGTCAAGTCCCTCTTAA 1572 0.5083 MMQISSTVPAHKLHKFQAIRCPSFSFRCQQASSSSLKQPSIFQTKPFISTESTRLHLANLDKLLETQKPVVPPTQIQHQPIINDPKEKKGRSFLEGLDLGRLWPEMKATDEMSPRHLKRLQRLLSMTGEYSPRNILGGRWREYHGSNDWKGMLDPLDENLRREVVRYGEFVQAAYQAFHSDPAMSTEEPPHPQHVALPDRSYRMTKSLYATSSIGLPKWVDEVAPDLGWMTQRSSWVGYVAVCEDRREIARMGRRDIIISLRGTSTCMEWAENLRAHMVEMGDEEGKAKVECGFMSLYKTKGAQVASLAESVVEEVRRLIDLYRGEELSISVIGHSLGATLALLVADEISTCCPKVPPVAVFSFGGPRVGNKAFGDRLTAKNVKVLRIVNSQDVITRVPGIFVSEELEQKIRNVGGGVLEENTPLAYSHVGTELRVQTKMSPYLKPDADMACCHDLEAYLHLVDGFLASNCPFRSNAKRSLARLMQDQSANVKKLYTSKAKSLTVNLSRQGSMSMSSCLSSPS* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0319 523 PANTHER GLYCEROLIPASE A1 2 509 - -
Gso11g0319 523 CDD Lipase_3 160 464 - -
Gso11g0319 523 SUPERFAMILY alpha/beta-Hydrolases 231 465 IPR029058 -
Gso11g0319 523 Pfam Lipase (class 3) 258 401 IPR002921 GO:0006629
Gso11g0319 523 Gene3D alpha/beta hydrolase 139 516 IPR029058 -
Gso11g0319 523 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 2 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0319 Gso-Chr11 2701577 2703287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0319 26 523 Acyl Lipid Metabolism Gene Families AT4G16820 57.115 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0319 - - gmx:100819994 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1755 1 54348797 54350509 Gso11g0319 11 2701577 2703287 GST
Gso11g0319 11 2701577 2703287 Gso20g1085 20 40600536 40605832 PCT
Gso11g0319 11 2701577 2703287 Gso10g2271 10 49780153 49783767 PCT